STRINGSTRING
Fbal_0016 Fbal_0016 Fbal_0018 Fbal_0018 Fbal_0457 Fbal_0457 Fbal_0458 Fbal_0458 Fbal_0540 Fbal_0540 Fbal_1684 Fbal_1684 Fbal_1806 Fbal_1806 pyrD pyrD Fbal_2117 Fbal_2117 Fbal_2260 Fbal_2260 Fbal_2488 Fbal_2488 Fbal_2489 Fbal_2489
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Fbal_0016Protoporphyrinogen oxidase; COGs: COG4635 Flavodoxin; InterPro IPR008254; KEGG: saz:Sama_0036 protoporphyrinogen oxidase; PRIAM: Protoporphyrinogen oxidase; SPTR: A2V477 Protoporphyrinogen oxidase. (174 aa)
Fbal_0018Protoporphyrinogen oxidase; COGs: COG4635 Flavodoxin; InterPro IPR001226: IPR008254; KEGG: sse:Ssed_0029 protoporphyrinogen oxidase; PRIAM: Protoporphyrinogen oxidase; SPTR: A2V475 Protoporphyrinogen oxidase. (178 aa)
Fbal_0457COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR004112: IPR006076: IPR003953: IPR003952: IPR 014006; KEGG: shn:Shewana3_0403 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; PRIAM: Succinate dehydrogenase; SPTR: A2UYL5 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate redu [...] (653 aa)
Fbal_0458COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001041: IPR006058: IPR004489; KEGG: lhk:LHK_02342 succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; PRIAM: Succinate dehydrogenase; SPTR: A2UYL4 Succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein. (244 aa)
Fbal_0540COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR006076: IPR003953: IPR006311: IPR010960; KEGG: swd:Swoo_0275 flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; SPTR: A2UXH7 Flavocytochrome c; TIGRFAM: flavocytochrome c; PFAM: FAD binding domain; TIGRFAM: flavocytochrome c; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (509 aa)
Fbal_1684Protoporphyrinogen oxidase; COGs: COG4635 Flavodoxin; KEGG: sfr:Sfri_0813 protoporphyrinogen oxidase; PRIAM: Protoporphyrinogen oxidase; SPTR: A2V477 Protoporphyrinogen oxidase; PFAM: Flavodoxin. (176 aa)
Fbal_1806COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR013027: IPR006076: IPR004792: IPR003953: IPR 011031: IPR010960; KEGG: sse:Ssed_3877 succinate dehydrogenase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; SPTR: Q07WU7 Fumarate reductase flavoprotein subunit; TIGRFAM: flavocytochrome c; PFAM: FAD binding domain; TIGRFAM: flavocytochrome c; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH su [...] (594 aa)
pyrDDihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (341 aa)
Fbal_2117COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR006076: IPR003953: IPR006311; KEGG: sfr:Sfri_3694 twin-arginine translocation pathway signal; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; SPTR: A2UV06 Twin-arginine translocation pathway signal; PFAM: FAD binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence. (559 aa)
Fbal_2260COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR013027: IPR002218: IPR006076: IPR004792: IPR 003953: IPR011031: IPR010960; KEGG: sfr:Sfri_2586 flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; HI0933 family protein; SPTR: Q9Z4P0 Fumarate reductase flavoprotein subunit; TIGRFAM: flavocytochrome c; PFAM: FAD binding domain; TIGRFAM: flavocytochrome c; Belongs to the FAD-de [...] (588 aa)
Fbal_2488COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001041: IPR017900: IPR004489; KEGG: saz:Sama_1426 succinate dehydrogenase iron-sulfur subunit; PRIAM: Succinate dehydrogenase; SPTR: A2V1H3 Succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein. (235 aa)
Fbal_2489COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR013027: IPR004112: IPR003953: IPR003952: IPR 014006: IPR011281; KEGG: asa:ASA_2359 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: A3WKB9 Succinate dehydrogenase; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; succinate dehydrogenase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate [...] (586 aa)
Your Current Organism:
Ferrimonas balearica
NCBI taxonomy Id: 550540
Other names: F. balearica DSM 9799, Ferrimonas balearica DSM 9799, Ferrimonas balearica PAT, Ferrimonas balearica str. DSM 9799, Ferrimonas balearica strain DSM 9799
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.