Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| apt | purD | SAMN05192550_1767 | SAMN05192550_0596 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.438 |
| apt | purF | SAMN05192550_1767 | SAMN05192550_0793 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Amidophosphoribosyltransferase. | 0.461 |
| carA | purD | SAMN05192550_2310 | SAMN05192550_0596 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.786 |
| carA | purF | SAMN05192550_2310 | SAMN05192550_0793 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Amidophosphoribosyltransferase. | 0.963 |
| carA | pyrB | SAMN05192550_2310 | SAMN05192550_3030 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
| carA | pyrD | SAMN05192550_2310 | SAMN05192550_1670 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.902 |
| carA | pyrF | SAMN05192550_2310 | SAMN05192550_3136 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.890 |
| purD | apt | SAMN05192550_0596 | SAMN05192550_1767 | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.438 |
| purD | carA | SAMN05192550_0596 | SAMN05192550_2310 | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.786 |
| purD | purF | SAMN05192550_0596 | SAMN05192550_0793 | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | Amidophosphoribosyltransferase. | 0.998 |
| purD | pyrB | SAMN05192550_0596 | SAMN05192550_3030 | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.575 |
| purD | pyrD | SAMN05192550_0596 | SAMN05192550_1670 | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.546 |
| purD | pyrF | SAMN05192550_0596 | SAMN05192550_3136 | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.509 |
| purF | apt | SAMN05192550_0793 | SAMN05192550_1767 | Amidophosphoribosyltransferase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.461 |
| purF | carA | SAMN05192550_0793 | SAMN05192550_2310 | Amidophosphoribosyltransferase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.963 |
| purF | purD | SAMN05192550_0793 | SAMN05192550_0596 | Amidophosphoribosyltransferase. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.998 |
| purF | pyrB | SAMN05192550_0793 | SAMN05192550_3030 | Amidophosphoribosyltransferase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.690 |
| purF | pyrD | SAMN05192550_0793 | SAMN05192550_1670 | Amidophosphoribosyltransferase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.520 |
| purF | pyrF | SAMN05192550_0793 | SAMN05192550_3136 | Amidophosphoribosyltransferase. | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.573 |
| pyrB | carA | SAMN05192550_3030 | SAMN05192550_2310 | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.999 |
page 1 of 2