STRINGSTRING
SDJ91870.1 SDJ91870.1 gdhA gdhA aspC1 aspC1 argD argD aspC2 aspC2 argH argH SDJ91607.1 SDJ91607.1 argB argB argF argF argD-2 argD-2 argC argC SDJ91906.1 SDJ91906.1 rocF rocF glnII glnII glnA glnA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDJ91870.1Argininosuccinate synthase. (397 aa)
gdhAGlutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (447 aa)
aspC1Aspartate aminotransferase. (396 aa)
argDAcetylornithine/succinyldiaminopimelate/putresci ne aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (398 aa)
aspC2Aspartate aminotransferase. (405 aa)
argHArgininosuccinate lyase. (426 aa)
SDJ91607.1Acetylornithine deacetylase. (358 aa)
argBN-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (262 aa)
argFOrnithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (317 aa)
argD-2Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (379 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (325 aa)
SDJ91906.1Hypothetical protein. (205 aa)
rocFArginase; Belongs to the arginase family. (320 aa)
glnIIGlutamine synthetase. (339 aa)
glnAGlutamine synthetase. (729 aa)
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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