STRINGSTRING
asd asd gltA-2 gltA-2 argD argD KFX04015.1 KFX04015.1 KFX05787.1 KFX05787.1 argA argA ilvM ilvM KFX05961.1 KFX05961.1 KFX06084.1 KFX06084.1 KFX06144.1 KFX06144.1 fxsA fxsA KFX06194.1 KFX06194.1 KFX07235.1 KFX07235.1 KFX07157.1 KFX07157.1 KFW99883.1 KFW99883.1 KFW99400.1 KFW99400.1 KFX01430.1 KFX01430.1 KFX04797.1 KFX04797.1 KFW99941.1 KFW99941.1 KFX06931.1 KFX06931.1 gltA gltA KFX06518.1 KFX06518.1 KFX07296.1 KFX07296.1 KFX07480.1 KFX07480.1 KFX07544.1 KFX07544.1 KFX07606.1 KFX07606.1 KFX07372.1 KFX07372.1 KFX07702.1 KFX07702.1 KFX07833.1 KFX07833.1 KFX07903.1 KFX07903.1 KFX07992.1 KFX07992.1 KFX05107.1 KFX05107.1 KFX05236.1 KFX05236.1 KFX05237.1 KFX05237.1 leuD leuD leuC leuC KFX03451.1 KFX03451.1 KFX03281.1 KFX03281.1 KFX02916.1 KFX02916.1 argB argB argC argC argE argE leuB leuB leuA leuA KFX05252.1 KFX05252.1 ilvH ilvH KFX05301.1 KFX05301.1 KFX04746.1 KFX04746.1 KFX04771.1 KFX04771.1 KFX04824.1 KFX04824.1 KFX02754.1 KFX02754.1 KFX02591.1 KFX02591.1 KFX02450.1 KFX02450.1 ilvC ilvC ilvD ilvD ilvE ilvE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
asdAspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (367 aa)
gltA-2Type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family. (427 aa)
argDAcetylornithine aminotransferase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (408 aa)
KFX04015.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
KFX05787.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
argAN-acetylglutamate synthase; Catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetyltransferase family. ArgA subfamily. (441 aa)
ilvMAcetolactate synthase 2 regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
KFX05961.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetyltransferase family. YpeA subfamily. (141 aa)
KFX06084.1Catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (559 aa)
KFX06144.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)
fxsAF exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
KFX06194.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)
KFX07235.1Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
KFX07157.1Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
KFW99883.1Methionine aminotransferase; Catalyzes the transfer of an amino moiety; preference for methionine followed by histidine and phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
KFW99400.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
KFX01430.1Acetolactate synthase catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (548 aa)
KFX04797.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
KFW99941.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
KFX06931.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
gltAType II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family. (428 aa)
KFX06518.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
KFX07296.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)
KFX07480.1Diaminobutyrate--2-oxoglutarate aminotransferase; Catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (460 aa)
KFX07544.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
KFX07606.1Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)
KFX07372.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
KFX07702.1Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (890 aa)
KFX07833.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
KFX07903.1GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
KFX07992.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
KFX05107.1Aspartate kinase; Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. (458 aa)
KFX05236.1Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)
KFX05237.1Acetolactate synthase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (554 aa)
leuDIsopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (200 aa)
leuCIsopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (466 aa)
KFX03451.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
KFX03281.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)
KFX02916.1Histidine utilization repressor; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
argBAcetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. (257 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (334 aa)
argEAcetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
leuB3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. (363 aa)
leuA2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (532 aa)
KFX05252.1Acetolactate synthase 3 catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa)
ilvHAcetolactate synthase 3 regulatory subunit; With IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
KFX05301.1Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aconitase/IPM isomerase family. (887 aa)
KFX04746.1Semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate-semialdehyde dehydrogenase family. (336 aa)
KFX04771.1Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
KFX04824.1Aminotransferase class IV; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
KFX02754.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
KFX02591.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)
KFX02450.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (82 aa)
ilvCKetol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (492 aa)
ilvDDihydroxy-acid dehydratase; Catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family. (616 aa)
ilvEBranched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (308 aa)
Your Current Organism:
Pectobacterium betavasculorum
NCBI taxonomy Id: 55207
Other names: ATCC 43762, CFBP 2122, CIP 105193, DSM 18076, Erwinia carotovora subsp. betavasculorum, ICMP 4226, LMG 2464, LMG 2466, LMG:2464, LMG:2466, NCPPB 2795, P. betavasculorum, Pectobacterium carotovorum subsp. betavasculorum, UCPB 193
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