(18 nodes) Mixed, incl. Two-component regulatory system, and Peptidase S1C network (Corynebacterium matruchotii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EFM47927.1	Hypothetical protein. (143 aa)
	EFM47877.1	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. (507 aa)
	EFM48174.1	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. (222 aa)
	EFM47789.1	PAS domain S-box protein. (690 aa)
	EFM48186.1	Hypothetical protein. (64 aa)
	EFM47733.1	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994. (227 aa)
	EFM47934.1	Trypsin; Identified by match to protein family HMM PF00089. (477 aa)
	EFM48079.1	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. (517 aa)
	mprA	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. (230 aa)
	mtrA	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. (228 aa)
	EFM49953.1	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. (562 aa)
	lpqB	Putative lipoprotein LpqB. (573 aa)
	EFM49270.1	Identified by match to protein family HMM PF06738. (468 aa)
	EFM49603.1	Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. (433 aa)
	EFM49311.1	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440. (174 aa)
	EFM49296.1	Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. (490 aa)
	EFM49449.1	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. (234 aa)
	EFM49544.1	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. (491 aa)

Your Current Organism:

Corynebacterium matruchotii

NCBI taxonomy Id: 553207
Other names: C. matruchotii ATCC 14266, Corynebacterium matruchotii ATCC 14266, Corynebacterium matruchotii str. ATCC 14266, Corynebacterium matruchotii strain ATCC 14266

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFM47733.1	EFM47934.1	HMPREF0299_5613	HMPREF0299_5614	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994.	Trypsin; Identified by match to protein family HMM PF00089.	0.928
EFM47733.1	EFM48079.1	HMPREF0299_5613	HMPREF0299_5615	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994.	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.621
EFM47733.1	EFM48186.1	HMPREF0299_5613	HMPREF0299_5612	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994.	Hypothetical protein.	0.795
EFM47733.1	mprA	HMPREF0299_5613	HMPREF0299_5616	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.538
EFM47789.1	EFM48174.1	HMPREF0299_5574	HMPREF0299_5432	PAS domain S-box protein.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.587
EFM47789.1	EFM49449.1	HMPREF0299_5574	HMPREF0299_7581	PAS domain S-box protein.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.587
EFM47789.1	EFM49953.1	HMPREF0299_5574	HMPREF0299_6252	PAS domain S-box protein.	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.764
EFM47789.1	mprA	HMPREF0299_5574	HMPREF0299_5616	PAS domain S-box protein.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.587
EFM47789.1	mtrA	HMPREF0299_5574	HMPREF0299_6251	PAS domain S-box protein.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.587
EFM47877.1	EFM47927.1	HMPREF0299_5431	HMPREF0299_5430	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Hypothetical protein.	0.773
EFM47877.1	EFM48174.1	HMPREF0299_5431	HMPREF0299_5432	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.982
EFM47877.1	EFM49449.1	HMPREF0299_5431	HMPREF0299_7581	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.881
EFM47877.1	EFM49953.1	HMPREF0299_5431	HMPREF0299_6252	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.538
EFM47877.1	mprA	HMPREF0299_5431	HMPREF0299_5616	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.900
EFM47877.1	mtrA	HMPREF0299_5431	HMPREF0299_6251	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.885
EFM47927.1	EFM47877.1	HMPREF0299_5430	HMPREF0299_5431	Hypothetical protein.	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.773
EFM47927.1	EFM48174.1	HMPREF0299_5430	HMPREF0299_5432	Hypothetical protein.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.773
EFM47934.1	EFM47733.1	HMPREF0299_5614	HMPREF0299_5613	Trypsin; Identified by match to protein family HMM PF00089.	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994.	0.928
EFM47934.1	EFM48079.1	HMPREF0299_5614	HMPREF0299_5615	Trypsin; Identified by match to protein family HMM PF00089.	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.678
EFM47934.1	EFM48186.1	HMPREF0299_5614	HMPREF0299_5612	Trypsin; Identified by match to protein family HMM PF00089.	Hypothetical protein.	0.695

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