(5 nodes) Two-component regulatory system, and Peptidase S1C network (Corynebacterium matruchotii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EFM48186.1	Hypothetical protein. (64 aa)
	EFM47733.1	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994. (227 aa)
	EFM47934.1	Trypsin; Identified by match to protein family HMM PF00089. (477 aa)
	EFM48079.1	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. (517 aa)
	mprA	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. (230 aa)

Your Current Organism:

Corynebacterium matruchotii

NCBI taxonomy Id: 553207
Other names: C. matruchotii ATCC 14266, Corynebacterium matruchotii ATCC 14266, Corynebacterium matruchotii str. ATCC 14266, Corynebacterium matruchotii strain ATCC 14266

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFM47733.1	EFM47934.1	HMPREF0299_5613	HMPREF0299_5614	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994.	Trypsin; Identified by match to protein family HMM PF00089.	0.928
EFM47733.1	EFM48079.1	HMPREF0299_5613	HMPREF0299_5615	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994.	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.621
EFM47733.1	EFM48186.1	HMPREF0299_5613	HMPREF0299_5612	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994.	Hypothetical protein.	0.795
EFM47733.1	mprA	HMPREF0299_5613	HMPREF0299_5616	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.538
EFM47934.1	EFM47733.1	HMPREF0299_5614	HMPREF0299_5613	Trypsin; Identified by match to protein family HMM PF00089.	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994.	0.928
EFM47934.1	EFM48079.1	HMPREF0299_5614	HMPREF0299_5615	Trypsin; Identified by match to protein family HMM PF00089.	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.678
EFM47934.1	EFM48186.1	HMPREF0299_5614	HMPREF0299_5612	Trypsin; Identified by match to protein family HMM PF00089.	Hypothetical protein.	0.695
EFM47934.1	mprA	HMPREF0299_5614	HMPREF0299_5616	Trypsin; Identified by match to protein family HMM PF00089.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.682
EFM48079.1	EFM47733.1	HMPREF0299_5615	HMPREF0299_5613	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994.	0.621
EFM48079.1	EFM47934.1	HMPREF0299_5615	HMPREF0299_5614	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Trypsin; Identified by match to protein family HMM PF00089.	0.678
EFM48079.1	EFM48186.1	HMPREF0299_5615	HMPREF0299_5612	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Hypothetical protein.	0.473
EFM48079.1	mprA	HMPREF0299_5615	HMPREF0299_5616	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.990
EFM48186.1	EFM47733.1	HMPREF0299_5612	HMPREF0299_5613	Hypothetical protein.	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994.	0.795
EFM48186.1	EFM47934.1	HMPREF0299_5612	HMPREF0299_5614	Hypothetical protein.	Trypsin; Identified by match to protein family HMM PF00089.	0.695
EFM48186.1	EFM48079.1	HMPREF0299_5612	HMPREF0299_5615	Hypothetical protein.	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.473
EFM48186.1	mprA	HMPREF0299_5612	HMPREF0299_5616	Hypothetical protein.	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.406
mprA	EFM47733.1	HMPREF0299_5616	HMPREF0299_5613	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Molybdopterin binding domain protein; Identified by match to protein family HMM PF00994.	0.538
mprA	EFM47934.1	HMPREF0299_5616	HMPREF0299_5614	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Trypsin; Identified by match to protein family HMM PF00089.	0.682
mprA	EFM48079.1	HMPREF0299_5616	HMPREF0299_5615	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.990
mprA	EFM48186.1	HMPREF0299_5616	HMPREF0299_5612	Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Hypothetical protein.	0.406

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