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| | EFM49666.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (241 aa) |
| | EFM49679.1 | Identified by match to protein family HMM PF04294. (565 aa) |
| | EFM49325.1 | Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (208 aa) |
| | EFM49327.1 | Hypothetical protein. (377 aa) |
| | EFM49670.1 | Identified by match to protein family HMM PF01925. (309 aa) |
| | EFM49563.1 | Lanthionine synthetase C-like protein. (866 aa) |
| | lanM | Type 2 lantibiotic biosynthesis protein LanM; Identified by match to protein family HMM PF05147. (945 aa) |
| | EFM49275.1 | Hypothetical protein. (179 aa) |
| | EFM49706.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (307 aa) |
| | radA | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (461 aa) |
| | EFM49449.1 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. (234 aa) |
| | EFM49544.1 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. (491 aa) |
| | EFM49390.1 | CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. (233 aa) |
| | EFM49347.1 | TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (384 aa) |
| | EFM49391.1 | Histidine kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730. (362 aa) |
| | EFM49717.1 | Hypothetical protein. (530 aa) |
| | EFM49255.1 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545. (216 aa) |
| | EFM49587.1 | Transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196; match to protein family HMM PF01590. (281 aa) |
| | EFM48226.1 | Identified by match to protein family HMM PF04012. (452 aa) |
| | EFM48365.1 | Heavy metal-associated domain protein; Identified by match to protein family HMM PF00403. (66 aa) |
| | EFM48274.1 | Hypothetical protein. (719 aa) |
| | EFM48344.1 | Hypothetical protein. (720 aa) |
| | EFM48243.1 | Hypothetical protein. (716 aa) |
| | EFM48356.1 | Transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. (223 aa) |
| | EFM48370.1 | Transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. (224 aa) |
| | EFM48363.1 | Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; Identified by match to protein family HMM PF00375; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (435 aa) |
| | EFM48324.1 | Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. (212 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (594 aa) |
| | EFM48336.1 | Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687. (830 aa) |
| | EFM48391.1 | Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; Identified by match to protein family HMM PF00375; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (445 aa) |
| | EFM48205.1 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. (223 aa) |
| | EFM48077.1 | Histidine kinase; Identified by match to protein family HMM PF07730. (385 aa) |
| | EFM48183.1 | Hypothetical protein. (54 aa) |
| | EFM47778.1 | Identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Belongs to the SUA5 family. (227 aa) |
| | EFM48153.1 | Nitrate reductase, alpha subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01580; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1247 aa) |
| | narH | Nitrate reductase, beta subunit; Identified by match to protein family HMM TIGR01660. (542 aa) |
| | narJ | Nitrate reductase molybdenum cofactor assembly chaperone; Identified by match to protein family HMM PF02613; match to protein family HMM TIGR00684. (230 aa) |
| | narI | Respiratory nitrate reductase, gamma subunit; Identified by match to protein family HMM PF02665; match to protein family HMM TIGR00351. (259 aa) |
| | EFM48042.1 | Hypothetical protein. (274 aa) |
| | EFM47958.1 | Hypothetical protein. (232 aa) |
| | putP | Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (507 aa) |
| | EFM47877.1 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. (507 aa) |
| | EFM48174.1 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. (222 aa) |
| | EFM48142.1 | Hypothetical protein. (159 aa) |
| | EFM47901.1 | Identified by match to protein family HMM PF06210. (187 aa) |
| | EFM47891.1 | Hypothetical protein. (122 aa) |
| | EFM47815.1 | RNA polymerase sigma factor SigE; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. (196 aa) |
| | EFM47918.1 | Identified by match to protein family HMM PF01170; match to protein family HMM PF02384; match to protein family HMM PF05175. (571 aa) |
| | EFM47903.1 | Hypothetical protein. (244 aa) |
| | EFM47789.1 | PAS domain S-box protein. (690 aa) |
| | EFM47934.1 | Trypsin; Identified by match to protein family HMM PF00089. (477 aa) |
| | EFM48079.1 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. (517 aa) |
| | mprA | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. (230 aa) |
| | EFM47940.1 | HpcH/HpaI aldolase/citrate lyase family protein; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. (274 aa) |
| | EFM48035.1 | CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. (315 aa) |
| | EFM49920.1 | Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. (196 aa) |
| | EFM49797.1 | Identified by match to protein family HMM PF04331. (839 aa) |
| | EFM49754.1 | Identified by match to protein family HMM PF03176. (814 aa) |
| | EFM50188.1 | Sigma-70 region 2; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. (188 aa) |
| | EFM49913.1 | Transposase, IS4 family; Identified by match to protein family HMM PF01609. (266 aa) |
| | EFM50298.1 | Histidine kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730. (422 aa) |
| | EFM50142.1 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. (232 aa) |
| | EFM49846.1 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (331 aa) |
| | EFM49821.1 | Identified by match to protein family HMM PF08044. (254 aa) |
| | EFM49988.1 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281. (223 aa) |
| | EFM50268.1 | Histidine kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730. (389 aa) |
| | EFM49896.1 | Hypothetical protein. (416 aa) |
| | EFM49805.1 | Hypothetical protein. (280 aa) |
| | EFM49725.1 | RNA polymerase sigma factor SigD; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa) |
| | EFM50113.1 | Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; Identified by match to protein family HMM PF00375; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (471 aa) |
| | EFM50025.1 | Transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. (232 aa) |
| | EFM50038.1 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF02518; match to protein family HMM PF04024. (383 aa) |
| | EFM49790.1 | Beta-lactamase; Identified by match to protein family HMM PF00144. (388 aa) |
| | mtrA | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. (228 aa) |
| | EFM49953.1 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. (562 aa) |
| | EFM49723.1 | RNA polymerase sigma-70 factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR02947; Belongs to the sigma-70 factor family. ECF subfamily. (195 aa) |
| | EFM48873.1 | Putative membrane protein; Identified by match to protein family HMM PF00892. (369 aa) |
| | EFM48999.1 | Trypsin; Identified by match to protein family HMM PF00089. (203 aa) |
| | EFM49079.1 | Cytochrome oxidase assembly protein; Identified by match to protein family HMM PF02628. (273 aa) |
| | EFM49219.1 | Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022. (218 aa) |
| | EFM48616.1 | Cytochrome oxidase assembly protein; Identified by match to protein family HMM PF02628. (327 aa) |
| | EFM48466.1 | CHAP domain protein; Identified by match to protein family HMM PF05257. (477 aa) |
| | EFM49060.1 | Identified by match to protein family HMM PF04012. (278 aa) |
| | infB | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (1009 aa) |
| | EFM48589.1 | Hypothetical protein. (510 aa) |
| | EFM48564.1 | Tex-like protein N-terminal domain protein; Identified by match to protein family HMM PF00575; match to protein family HMM PF09371. (776 aa) |
| | EFM48702.1 | Putative protein-P-II uridylyltransferase; Identified by match to protein family HMM PF01909; match to protein family HMM PF01966; match to protein family HMM PF08335. (713 aa) |
| | EFM48915.1 | Nitrogen regulatory protein P-II; Identified by match to protein family HMM PF00543; Belongs to the P(II) protein family. (137 aa) |
| | EFM48511.1 | N-6 DNA Methylase; Identified by match to protein family HMM PF02384. (455 aa) |
| | EFM48617.1 | Putative ATP synthase F0, A subunit; Identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835. (494 aa) |
| | dinB | ImpB/MucB/SamB family protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (464 aa) |
| | EFM48993.1 | Identified by match to protein family HMM PF00877. (334 aa) |
| | glnA | Glutamine synthetase, type I; Identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653. (477 aa) |
| | EFM49073.1 | CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. (256 aa) |
| | EFM48791.1 | Glutamine synthetase, beta-grasp domain protein; Identified by match to protein family HMM PF00120; match to protein family HMM PF03951; Belongs to the glutamine synthetase family. (463 aa) |
| | EFM49027.1 | Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (141 aa) |
| | EFM49082.1 | Hypothetical protein. (124 aa) |
| | EFM48963.1 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. (200 aa) |
| | EFM48861.1 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730. (351 aa) |
| | EFM48740.1 | Histidine kinase; Identified by match to protein family HMM PF07730. (339 aa) |
| | EFM48662.1 | CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. (242 aa) |
| | EFM48558.1 | CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. (285 aa) |
| | EFM48687.1 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF02518. (381 aa) |
| | EFM48820.1 | Histidine kinase; Identified by match to protein family HMM PF07730. (377 aa) |
| | EFM48934.1 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. (215 aa) |
| | EFM49249.1 | Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687. (971 aa) |
| | EFM49300.1 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730. (412 aa) |
| | EFM49338.1 | Response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. (212 aa) |
| | whiB | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (113 aa) |
| | EFM49393.1 | Cyclic nucleotide-binding domain protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325. (227 aa) |
| | cvpA | Identified by match to protein family HMM PF00089; match to protein family HMM PF02674. (401 aa) |
| | EFM49319.1 | Hypothetical protein. (263 aa) |
| | EFM49283.1 | RNA polymerase sigma factor SigK; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa) |
| | EFM49367.1 | Peptidase, M23 family; Identified by match to protein family HMM PF01464; match to protein family HMM PF01551. (694 aa) |
| | agcS | Amino acid carrier protein; Identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835. (523 aa) |
| | agcS-2 | Amino acid carrier protein; Identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835. (508 aa) |
| | EFM49699.1 | CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. (253 aa) |
| | EFM49599.1 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730. (379 aa) |
| | EFM49715.1 | Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. (358 aa) |
| | EFM49358.1 | Identified by match to protein family HMM PF03176. (892 aa) |
