Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARF52850.1 | ARF54135.1 | B1H19_00310 | B1H19_07945 | Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyridoxamine 5'-phosphate oxidase family. | 0.900 |
| ARF52850.1 | ARF55841.1 | B1H19_00310 | B1H19_18105 | Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| ARF52850.1 | pdxH | B1H19_00310 | B1H19_24850 | Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.900 |
| ARF54135.1 | ARF52850.1 | B1H19_07945 | B1H19_00310 | Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyridoxamine 5'-phosphate oxidase family. | Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| ARF54135.1 | ARF55841.1 | B1H19_07945 | B1H19_18105 | Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyridoxamine 5'-phosphate oxidase family. | Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.911 |
| ARF54135.1 | pdxH | B1H19_07945 | B1H19_24850 | Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyridoxamine 5'-phosphate oxidase family. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.925 |
| ARF54135.1 | pdxS | B1H19_07945 | B1H19_09575 | Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyridoxamine 5'-phosphate oxidase family. | Pyridoxal 5'-phosphate synthase lyase subunit PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.916 |
| ARF54135.1 | pdxT | B1H19_07945 | B1H19_09570 | Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyridoxamine 5'-phosphate oxidase family. | Pyridoxal 5'-phosphate synthase glutaminase subunit PdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.915 |
| ARF54420.1 | ARF54423.1 | B1H19_09565 | B1H19_09580 | YebC/PmpR family DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.489 |
| ARF54420.1 | ARF54424.1 | B1H19_09565 | B1H19_09585 | YebC/PmpR family DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha-(1-2)-phosphatidylinositol mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.638 |
| ARF54420.1 | ARF54425.1 | B1H19_09565 | B1H19_09590 | YebC/PmpR family DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphatidylinositol mannoside acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.694 |
| ARF54420.1 | ARF54426.1 | B1H19_09565 | B1H19_09595 | YebC/PmpR family DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.636 |
| ARF54420.1 | ARF59325.1 | B1H19_09565 | B1H19_09605 | YebC/PmpR family DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.603 |
| ARF54420.1 | pdxS | B1H19_09565 | B1H19_09575 | YebC/PmpR family DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyridoxal 5'-phosphate synthase lyase subunit PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.913 |
| ARF54420.1 | pdxT | B1H19_09565 | B1H19_09570 | YebC/PmpR family DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyridoxal 5'-phosphate synthase glutaminase subunit PdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.933 |
| ARF54420.1 | ruvA | B1H19_09565 | B1H19_09555 | YebC/PmpR family DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Holliday junction branch migration protein RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.815 |
| ARF54420.1 | ruvB | B1H19_09565 | B1H19_09550 | YebC/PmpR family DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Holliday junction branch migration DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.841 |
| ARF54420.1 | ruvC | B1H19_09565 | B1H19_09560 | YebC/PmpR family DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.814 |
| ARF54423.1 | ARF54420.1 | B1H19_09580 | B1H19_09565 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | YebC/PmpR family DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.489 |
| ARF54423.1 | ARF54424.1 | B1H19_09580 | B1H19_09585 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha-(1-2)-phosphatidylinositol mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.945 |
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