(56 nodes) Protein kinase domain, and Forkhead associated domain network (Streptomyces gilvosporeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARF59181.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
	ARF53112.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (747 aa)
	ARF53113.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (710 aa)
	ARF59210.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (751 aa)
	ARF53373.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)
	ARF53668.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
	ARF53694.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (464 aa)
	ARF53695.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1148 aa)
	ARF53993.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (881 aa)
	ARF54087.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
	ARF54253.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (691 aa)
	ARF54255.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
	ARF54444.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
	ARF54682.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (858 aa)
	ARF59388.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (647 aa)
	ARF54991.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	ARF54992.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (827 aa)
	ARF59473.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (821 aa)
	ARF55553.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
	prfB	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. (368 aa)
	ARF55555.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
	ARF55556.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (537 aa)
	ARF55557.1	Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. (1076 aa)
	ARF55704.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (525 aa)
	ARF55765.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
	ARF55836.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (858 aa)
	ARF55858.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (822 aa)
	ARF59542.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (741 aa)
	ARF56079.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
	ARF56179.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (568 aa)
	ARF56253.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)
	ARF56255.1	Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
	ARF56325.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (539 aa)
	ARF56326.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (555 aa)
	ARF56361.1	Phosphopeptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
	ARF56362.1	FHA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)
	ARF56363.1	Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)
	ARF56364.1	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. (465 aa)
	ARF56365.1	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa)
	ARF56366.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (658 aa)
	ARF56578.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)
	ARF56579.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)
	ARF56580.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (75 aa)
	ARF56785.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (783 aa)
	ARF56991.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (708 aa)
	ARF57006.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (566 aa)
	ARF57124.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	ARF57125.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (731 aa)
	ARF57126.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (704 aa)
	ARF58012.1	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
	ARF58133.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
	ARF59822.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
	ARF58134.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (781 aa)
	ARF58191.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (631 aa)
	ARF58431.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	ARF58526.1	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)

Your Current Organism:

Streptomyces gilvosporeus

NCBI taxonomy Id: 553510
Other names: S. gilvosporeus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARF53112.1	ARF53113.1	B1H19_01990	B1H19_01995	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.822
ARF53112.1	ARF54087.1	B1H19_01990	B1H19_07670	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.722
ARF53112.1	ARF55765.1	B1H19_01990	B1H19_17675	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.834
ARF53112.1	ARF56253.1	B1H19_01990	B1H19_20555	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
ARF53112.1	ARF56255.1	B1H19_01990	B1H19_20565	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
ARF53112.1	ARF56325.1	B1H19_01990	B1H19_21000	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
ARF53112.1	ARF56326.1	B1H19_01990	B1H19_21005	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.595
ARF53112.1	ARF56362.1	B1H19_01990	B1H19_21240	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FHA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
ARF53112.1	ARF56363.1	B1H19_01990	B1H19_21245	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
ARF53112.1	ARF56366.1	B1H19_01990	B1H19_21260	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
ARF53112.1	ARF58526.1	B1H19_01990	B1H19_33925	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
ARF53112.1	ARF59181.1	B1H19_01990	B1H19_01985	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.745
ARF53112.1	ARF59388.1	B1H19_01990	B1H19_12480	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.597
ARF53113.1	ARF53112.1	B1H19_01995	B1H19_01990	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.822
ARF53113.1	ARF55765.1	B1H19_01995	B1H19_17675	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.790
ARF53113.1	ARF56255.1	B1H19_01995	B1H19_20565	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.788
ARF53113.1	ARF56363.1	B1H19_01995	B1H19_21245	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.788
ARF53113.1	ARF59181.1	B1H19_01995	B1H19_01985	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.732
ARF53373.1	ARF53695.1	B1H19_03620	B1H19_05435	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
ARF53373.1	ARF54087.1	B1H19_03620	B1H19_07670	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.727