STRINGSTRING
CTM89_20225 CTM89_20225 CTM89_03755 CTM89_03755 CTM89_02145 CTM89_02145 CRG86_012605 CRG86_012605 CTM89_19610 CTM89_19610 CTM89_13180 CTM89_13180 CTM89_06295 CTM89_06295 CTM89_12820 CTM89_12820 CTM89_02245 CTM89_02245 CTM89_03585 CTM89_03585
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CTM89_20225Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (324 aa)
CTM89_03755Unannotated protein; Belongs to the pseudouridine synthase RsuA family. (216 aa)
CTM89_02145Unannotated protein. (228 aa)
CRG86_012605Unannotated protein; Belongs to the pseudouridine synthase RsuA family. (231 aa)
CTM89_19610Unannotated protein. (245 aa)
CTM89_13180Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (235 aa)
CTM89_06295Unannotated protein. (585 aa)
CTM89_12820Unannotated protein; Belongs to the pseudouridine synthase RsuA family. (351 aa)
CTM89_02245Unannotated protein; Belongs to the pseudouridine synthase RsuA family. (379 aa)
CTM89_03585Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (314 aa)
Your Current Organism:
Photobacterium leiognathi
NCBI taxonomy Id: 553611
Other names: ATCC 25521, CAIM 327, CCUG 16229, CIP 66.5, LMG 4228, LMG:4228, P. leiognathi, Photobacterium sp. CMB_001
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