STRINGSTRING
ribA ribA queE queE pabB pabB CTM89_02385 CTM89_02385 folK folK lpoA lpoA folP folP CTM89_00565 CTM89_00565 CTM89_00575 CTM89_00575 mobA mobA CTM89_00620 CTM89_00620 yjjW yjjW folE folE CTM89_00890 CTM89_00890 CTM89_08335 CTM89_08335 CTM89_06670 CTM89_06670 CTM89_04455 CTM89_04455 ribB ribB CTM89_13530 CTM89_13530 CTM89_13385 CTM89_13385 ribB-2 ribB-2 CTM89_05655 CTM89_05655 folB folB folK-2 folK-2 phoU phoU queF queF CTM89_10390 CTM89_10390 ribA-2 ribA-2 CTM89_00385 CTM89_00385 CTM89_13225 CTM89_13225 CTM89_04285 CTM89_04285 CTM89_06180 CTM89_06180 CTM89_14480 CTM89_14480 mobB mobB CTM89_03535 CTM89_03535 CRG86_010555 CRG86_010555 moaC moaC moaA moaA CTM89_12710 CTM89_12710 pflA pflA CTM89_16775 CTM89_16775 queC queC CTM89_04710 CTM89_04710 CTM89_04715 CTM89_04715
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ribAUnannotated protein; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. (197 aa)
queEUnannotated protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (222 aa)
pabBUnannotated protein. (465 aa)
CTM89_02385Unannotated protein; Belongs to the Nudix hydrolase family. (141 aa)
folKUnannotated protein. (161 aa)
lpoAUnannotated protein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family. (588 aa)
folPUnannotated protein; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. (277 aa)
CTM89_00565Unannotated protein. (164 aa)
CTM89_00575Unannotated protein. (303 aa)
mobAUnannotated protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. (197 aa)
CTM89_00620Unannotated protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. (592 aa)
yjjWUnannotated protein. (289 aa)
folEUnannotated protein. (217 aa)
CTM89_00890Unannotated protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. (411 aa)
CTM89_08335Unannotated protein. (191 aa)
CTM89_06670Unannotated protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (312 aa)
CTM89_04455Unannotated protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. (158 aa)
ribBUnannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. (367 aa)
CTM89_13530Unannotated protein. (559 aa)
CTM89_13385Unannotated protein. (150 aa)
ribB-2Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family. (365 aa)
CTM89_05655Unannotated protein. (292 aa)
folBUnannotated protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (117 aa)
folK-2Unannotated protein. (160 aa)
phoUUnannotated protein; Plays a role in the regulation of phosphate uptake. (235 aa)
queFUnannotated protein; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). (282 aa)
CTM89_10390Unannotated protein; Belongs to the alkaline phosphatase family. (473 aa)
ribA-2Unannotated protein; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. (199 aa)
CTM89_00385Unannotated protein. (243 aa)
CTM89_13225Unannotated protein; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. (160 aa)
CTM89_04285Unannotated protein. (226 aa)
CTM89_06180Unannotated protein. (635 aa)
CTM89_14480Unannotated protein. (177 aa)
mobBUnannotated protein. (177 aa)
CTM89_03535Unannotated protein. (269 aa)
CRG86_010555Unannotated protein. (148 aa)
moaCUnannotated protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. (159 aa)
moaAUnannotated protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (329 aa)
CTM89_12710Unannotated protein; Belongs to the folylpolyglutamate synthase family. (419 aa)
pflAUnannotated protein; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. (246 aa)
CTM89_16775Unannotated protein. (252 aa)
queCUnannotated protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (232 aa)
CTM89_04710Unannotated protein. (276 aa)
CTM89_04715Unannotated protein. (113 aa)
Your Current Organism:
Photobacterium leiognathi
NCBI taxonomy Id: 553611
Other names: ATCC 25521, CAIM 327, CCUG 16229, CIP 66.5, LMG 4228, LMG:4228, P. leiognathi, Photobacterium sp. CMB_001
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