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rsxB_1 rsxB_1 EEG75883.1 EEG75883.1 EEG75885.1 EEG75885.1 rnfB rnfB rnfC rnfC porD porD iorA iorA gltD_1 gltD_1 EEG74881.1 EEG74881.1 iorA-2 iorA-2 EEG75031.1 EEG75031.1 EEG74448.1 EEG74448.1 hndC_2 hndC_2 bssD_2 bssD_2 fdx fdx EEG74604.1 EEG74604.1 yccM_1 yccM_1 asrC asrC EEG74734.1 EEG74734.1 yccM_2 yccM_2 EEG74317.1 EEG74317.1 hndC_1 hndC_1 hndD_1 hndD_1 EEG73185.1 EEG73185.1 EEG72978.1 EEG72978.1 nifJ nifJ narB narB dmsB dmsB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rsxB_14Fe-4S binding domain protein; KEGG: pab:PAB1471 3.6e-07 VOR; ketoisovalerate oxidoreductase subunit vorD K00188; Psort location: Cytoplasmic, score: 8.87. (237 aa)
EEG75883.14Fe-4S binding domain protein; KEGG: fnu:FN1223 7.1e-09 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase K00357; Psort location: Cytoplasmic, score: 8.87. (257 aa)
EEG75885.14Fe-4S binding domain protein; KEGG: mka:MK0930 1.7e-05 coenzyme F420-reducing hydrogenase, gamma subunit K00439; Psort location: Cytoplasmic, score: 8.87. (250 aa)
rnfBElectron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (263 aa)
rnfCElectron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (439 aa)
porD2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family; KEGG: mka:MK0081 4.9e-20 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171. (88 aa)
iorAIndolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (584 aa)
gltD_1Putative selenate reductase, YgfK subunit; KEGG: eci:UTI89_C3263 2.3e-196 ygfK; hypothetical protein YgfK K05299; Psort location: Cytoplasmic, score: 9.98. (996 aa)
EEG74881.14Fe-4S binding domain protein; KEGG: tma:TM1425 8.6e-09 NADH dehydrogenase I chain F K00335; Psort location: Cytoplasmic, score: 8.87. (203 aa)
iorA-2Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (601 aa)
EEG75031.1PAS domain S-box protein; KEGG: ctc:CTC02417 1.6e-37 periplasmic [Fe] hydrogenase 1 K00533; Psort location: Cytoplasmic, score: 8.87. (571 aa)
EEG74448.1Hydrogenase, Fe-only; KEGG: tte:TTE0894 2.4e-192 nuoG; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) K00336; Psort location: Cytoplasmic, score: 8.87. (583 aa)
hndC_24Fe-4S binding domain protein; KEGG: tte:TTE0893 9.8e-244 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335; Psort location: Cytoplasmic, score: 9.98. (595 aa)
bssD_2Glycyl-radical enzyme activating protein family protein; KEGG: pca:Pcar_0943 2.7e-58 putative pyruvate formate-lyase activating enzyme K04069; Psort location: Cytoplasmic, score: 9.98. (302 aa)
fdx4Fe-4S binding domain protein; KEGG: mth:MTH1819 9.9e-06 ferredoxin K00284:K00392; Psort location: Cytoplasmic, score: 8.87. (61 aa)
EEG74604.14Fe-4S binding domain protein; KEGG: cpr:CPR_0261 5.7e-81 hydrogenase subunit (ferredoxin) K00532; Psort location: Cytoplasmic, score: 8.87. (412 aa)
yccM_14Fe-4S binding domain protein; KEGG: eci:UTI89_C1055 1.9e-13 yccM; putative electron transport protein YccM K00168; Psort location: CytoplasmicMembrane, score: 9.99. (291 aa)
asrC4Fe-4S binding domain protein; KEGG: sso:SSO11071 5.0e-08 porD-2; pyruvate ferredoxin oxidoreductase, delta subunit K00171; Psort location: Cytoplasmic, score: 9.98. (374 aa)
EEG74734.14Fe-4S binding domain protein; KEGG: mma:MM3156 2.1e-60 oxidoreductase; Psort location: Cytoplasmic, score: 8.87. (385 aa)
yccM_24Fe-4S binding domain protein; KEGG: eci:UTI89_C1055 3.3e-13 yccM; putative electron transport protein YccM K00168; Psort location: CytoplasmicMembrane, score: 9.99. (312 aa)
EEG74317.1Rubredoxin; KEGG: cpr:CPR_0938 1.6e-213 periplasmic [Fe] hydrogenase 1 K00532; Psort location: Cytoplasmic, score: 8.87. (719 aa)
hndC_14Fe-4S binding domain protein; KEGG: chy:CHY_0732 1.0e-193 hydB; Fe-hydrogenase, beta subunit K00335; Psort location: Cytoplasmic, score: 9.98. (628 aa)
hndD_1Hydrogenase, Fe-only; KEGG: tte:TTE0894 1.7e-138 nuoG; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) K00336; Psort location: Cytoplasmic, score: 8.87. (560 aa)
EEG73185.14Fe-4S binding domain protein; KEGG: ctc:CTC02417 1.5e-50 periplasmic [Fe] hydrogenase 1 K00533; Psort location: Cytoplasmic, score: 8.87. (273 aa)
EEG72978.14Fe-4S binding domain protein; KEGG: mka:MK0323 2.1e-09 fwd_F2; probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing K00199; Psort location: Cytoplasmic, score: 8.87. (263 aa)
nifJPyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168. (1178 aa)
narBNitrate reductase, electron transfer subunit; KEGG: afu:AF0950 4.0e-25 cooF; carbon monoxide dehydrogenase, iron sulfur subunit K00196; Psort location: Cytoplasmic, score: 9.98. (150 aa)
dmsB4Fe-4S binding domain protein; KEGG: sat:SYN_00633 1.8e-23 formate dehydrogenase iron-sulfur subunit K04509; Psort location: Cytoplasmic, score: 9.98. (153 aa)
Your Current Organism:
Clostridium hylemonae
NCBI taxonomy Id: 553973
Other names: Clostridium hylemonae CCUG 45367, Clostridium hylemonae CIP 106689, Clostridium hylemonae DSM 15053, Clostridium hylemonae JCM 10539, Clostridium hylemonae TN-271, [. hylemonae DSM 15053, [Clostridium] hylemonae DSM 15053
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