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hndC_1 hndC_1 rnfC rnfC hndC_2 hndC_2 rnfC_1 rnfC_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hndC_14Fe-4S binding domain protein; KEGG: chy:CHY_0732 1.0e-193 hydB; Fe-hydrogenase, beta subunit K00335; Psort location: Cytoplasmic, score: 9.98. (628 aa)
rnfCElectron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (439 aa)
hndC_24Fe-4S binding domain protein; KEGG: tte:TTE0893 9.8e-244 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335; Psort location: Cytoplasmic, score: 9.98. (595 aa)
rnfC_1Respiratory-chain NADH dehydrogenase 51 Kd subunit; KEGG: eci:UTI89_C1819 2.9e-19 rnfC; electron transport complex protein RnfC K03615; Psort location: Cytoplasmic, score: 8.87. (442 aa)
Your Current Organism:
Clostridium hylemonae
NCBI taxonomy Id: 553973
Other names: Clostridium hylemonae CCUG 45367, Clostridium hylemonae CIP 106689, Clostridium hylemonae DSM 15053, Clostridium hylemonae JCM 10539, Clostridium hylemonae TN-271, [. hylemonae DSM 15053, [Clostridium] hylemonae DSM 15053
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