(11 nodes) Mixed, incl. tRNA methylthiolation, and rRNA base methylation network (Chlorella variabilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	E1Z2V4_CHLVA	TRAM domain-containing protein. (298 aa)
	E1Z2V6_CHLVA	MTTase N-terminal domain-containing protein. (227 aa)
	E1Z4Q4_CHLVA	Uncharacterized protein. (186 aa)
	E1Z8L9_CHLVA	Uncharacterized protein. (524 aa)
	E1Z9B1_CHLVA	Uncharacterized protein. (158 aa)
	E1ZB26_CHLVA	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (618 aa)
	E1ZHP0_CHLVA	Uncharacterized protein. (635 aa)
	E1ZJ52_CHLVA	TP_methylase domain-containing protein. (295 aa)
	E1ZLU0_CHLVA	UPF0020 domain-containing protein. (602 aa)
	E1ZMF1_CHLVA	Hflx-type G domain-containing protein. (609 aa)
	E1ZS74_CHLVA	Uncharacterized protein. (490 aa)

Your Current Organism:

Chlorella variabilis

NCBI taxonomy Id: 554065
Other names: C. variabilis, Chlorella sp. 211-6, Chlorella sp. Bnd1-ZK, Chlorella sp. Dd1-ZK, Chlorella sp. F36-ZK, Chlorella sp. KM2-ZK, Chlorella sp. NC64A, Chlorella sp. OK1-ZK, Chlorella sp. SAG 211-6, Chlorella sp. So13-ZK, Chlorella sp. Syngen 2-3, SAG 211-6

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... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E1Z2V4_CHLVA	E1Z2V6_CHLVA	E1Z2V4	E1Z2V6	TRAM domain-containing protein.	MTTase N-terminal domain-containing protein.	0.558
E1Z2V6_CHLVA	E1Z2V4_CHLVA	E1Z2V6	E1Z2V4	MTTase N-terminal domain-containing protein.	TRAM domain-containing protein.	0.558
E1Z4Q4_CHLVA	E1Z9B1_CHLVA	E1Z4Q4	E1Z9B1	Uncharacterized protein.	Uncharacterized protein.	0.587
E1Z4Q4_CHLVA	E1ZJ52_CHLVA	E1Z4Q4	E1ZJ52	Uncharacterized protein.	TP_methylase domain-containing protein.	0.650
E1Z4Q4_CHLVA	E1ZS74_CHLVA	E1Z4Q4	E1ZS74	Uncharacterized protein.	Uncharacterized protein.	0.615
E1Z8L9_CHLVA	E1ZS74_CHLVA	E1Z8L9	E1ZS74	Uncharacterized protein.	Uncharacterized protein.	0.598
E1Z9B1_CHLVA	E1Z4Q4_CHLVA	E1Z9B1	E1Z4Q4	Uncharacterized protein.	Uncharacterized protein.	0.587
E1Z9B1_CHLVA	E1ZJ52_CHLVA	E1Z9B1	E1ZJ52	Uncharacterized protein.	TP_methylase domain-containing protein.	0.650
E1ZHP0_CHLVA	E1ZS74_CHLVA	E1ZHP0	E1ZS74	Uncharacterized protein.	Uncharacterized protein.	0.404
E1ZJ52_CHLVA	E1Z4Q4_CHLVA	E1ZJ52	E1Z4Q4	TP_methylase domain-containing protein.	Uncharacterized protein.	0.650
E1ZJ52_CHLVA	E1Z9B1_CHLVA	E1ZJ52	E1Z9B1	TP_methylase domain-containing protein.	Uncharacterized protein.	0.650
E1ZJ52_CHLVA	E1ZLU0_CHLVA	E1ZJ52	E1ZLU0	TP_methylase domain-containing protein.	UPF0020 domain-containing protein.	0.424
E1ZJ52_CHLVA	E1ZMF1_CHLVA	E1ZJ52	E1ZMF1	TP_methylase domain-containing protein.	Hflx-type G domain-containing protein.	0.438
E1ZLU0_CHLVA	E1ZJ52_CHLVA	E1ZLU0	E1ZJ52	UPF0020 domain-containing protein.	TP_methylase domain-containing protein.	0.424
E1ZMF1_CHLVA	E1ZJ52_CHLVA	E1ZMF1	E1ZJ52	Hflx-type G domain-containing protein.	TP_methylase domain-containing protein.	0.438
E1ZMF1_CHLVA	E1ZS74_CHLVA	E1ZMF1	E1ZS74	Hflx-type G domain-containing protein.	Uncharacterized protein.	0.679
E1ZS74_CHLVA	E1Z4Q4_CHLVA	E1ZS74	E1Z4Q4	Uncharacterized protein.	Uncharacterized protein.	0.615
E1ZS74_CHLVA	E1Z8L9_CHLVA	E1ZS74	E1Z8L9	Uncharacterized protein.	Uncharacterized protein.	0.598
E1ZS74_CHLVA	E1ZHP0_CHLVA	E1ZS74	E1ZHP0	Uncharacterized protein.	Uncharacterized protein.	0.404
E1ZS74_CHLVA	E1ZMF1_CHLVA	E1ZS74	E1ZMF1	Uncharacterized protein.	Hflx-type G domain-containing protein.	0.679

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