STRINGSTRING
DR999_PMT24001 DR999_PMT24001 DR999_PMT18395 DR999_PMT18395 DR999_PMT21125 DR999_PMT21125 DR999_PMT18406 DR999_PMT18406 DR999_PMT11401 DR999_PMT11401
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DR999_PMT24001Nucleoside diphosphate kinase. (213 aa)
DR999_PMT18395Sorting nexin-1. (224 aa)
DR999_PMT2112550S ribosomal protein L13; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (287 aa)
DR999_PMT18406E3 ubiquitin-protein ligase MARCH8. (187 aa)
DR999_PMT11401Claudin-16. (291 aa)
Your Current Organism:
Platysternon megacephalum
NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle
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