STRINGSTRING
DR999_PMT14644 DR999_PMT14644 DR999_PMT17010 DR999_PMT17010 DR999_PMT17612 DR999_PMT17612 DR999_PMT19416 DR999_PMT19416 DR999_PMT16382 DR999_PMT16382 DR999_PMT16635 DR999_PMT16635 DR999_PMT20261 DR999_PMT20261 DR999_PMT18877 DR999_PMT18877 DR999_PMT18585 DR999_PMT18585 DR999_PMT19346 DR999_PMT19346 DR999_PMT21736 DR999_PMT21736 DR999_PMT19367 DR999_PMT19367 DR999_PMT20134 DR999_PMT20134 DR999_PMT20577 DR999_PMT20577 DR999_PMT22865 DR999_PMT22865 DR999_PMT20226 DR999_PMT20226 DR999_PMT21676 DR999_PMT21676 DR999_PMT21366 DR999_PMT21366 DR999_PMT22388 DR999_PMT22388 DR999_PMT23617 DR999_PMT23617 DR999_PMT22490 DR999_PMT22490 DR999_PMT22601 DR999_PMT22601 DR999_PMT12310 DR999_PMT12310 DR999_PMT00900 DR999_PMT00900 DR999_PMT00300 DR999_PMT00300 DR999_PMT00269 DR999_PMT00269 DR999_PMT01199 DR999_PMT01199 DR999_PMT01347 DR999_PMT01347 DR999_PMT05862 DR999_PMT05862 DR999_PMT00595 DR999_PMT00595 DR999_PMT03744 DR999_PMT03744 DR999_PMT06819 DR999_PMT06819 DR999_PMT08770 DR999_PMT08770 DR999_PMT04891 DR999_PMT04891 DR999_PMT09446 DR999_PMT09446 DR999_PMT08725 DR999_PMT08725 DR999_PMT09907 DR999_PMT09907 DR999_PMT12994 DR999_PMT12994 DR999_PMT12388 DR999_PMT12388 DR999_PMT11021 DR999_PMT11021 DR999_PMT14936 DR999_PMT14936 DR999_PMT15003 DR999_PMT15003 DR999_PMT10794 DR999_PMT10794 DR999_PMT14320 DR999_PMT14320 DR999_PMT16291 DR999_PMT16291 DR999_PMT15295 DR999_PMT15295
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DR999_PMT14644Receptor-type tyrosine-protein phosphatase kappa-like; Belongs to the cyclin family. (748 aa)
DR999_PMT17010Protein ENL. (552 aa)
DR999_PMT17612E3 ubiquitin-protein ligase NEURL3. (275 aa)
DR999_PMT19416DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (103 aa)
DR999_PMT16382Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (516 aa)
DR999_PMT16635Dedicator of cytokinesis protein 2. (67 aa)
DR999_PMT20261Histone-lysine N-methyltransferase PRDM9-like. (164 aa)
DR999_PMT18877DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
DR999_PMT18585Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
DR999_PMT19346FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (555 aa)
DR999_PMT21736DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
DR999_PMT19367Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13. (232 aa)
DR999_PMT20134Transcription elongation factor SPT5. (1182 aa)
DR999_PMT20577Butyrophilin subfamily 1 member A1-like. (172 aa)
DR999_PMT22865Elongation factor Tu. (130 aa)
DR999_PMT20226Y-box-binding protein 2. (795 aa)
DR999_PMT21676FACT complex subunit SPT16. (806 aa)
DR999_PMT21366General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (460 aa)
DR999_PMT22388DNA-directed RNA polymerase II subunit RPB1. (386 aa)
DR999_PMT236172-alkenal reductase. (92 aa)
DR999_PMT22490KDEL motif-containing protein 1-like. (94 aa)
DR999_PMT22601Ornithine cyclodeaminase. (81 aa)
DR999_PMT12310Protein Wnt-11. (359 aa)
DR999_PMT00900Potassium voltage-gated channel subfamily C member 1-like. (576 aa)
DR999_PMT00300Protocadherin Fat 1; Belongs to the cyclin family. (577 aa)
DR999_PMT00269General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (262 aa)
DR999_PMT01199Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (194 aa)
DR999_PMT01347Oxysterols receptor LXR-alpha. (670 aa)
DR999_PMT05862Neuropeptide W. (1166 aa)
DR999_PMT00595Cyclin-H; Belongs to the cyclin family. (328 aa)
DR999_PMT03744DNA-directed RNA polymerase II subunit RPB11-a. (117 aa)
DR999_PMT06819Zinc finger MIZ domain-containing protein 1-like. (523 aa)
DR999_PMT08770Cysteinyl leukotriene receptor 2. (577 aa)
DR999_PMT04891Fibroblast growth factor 3. (188 aa)
DR999_PMT09446Laminin subunit beta-4. (285 aa)
DR999_PMT08725Histone-lysine N-methyltransferase SETDB2. (351 aa)
DR999_PMT09907Kelch-like protein 26. (127 aa)
DR999_PMT12994Anoctamin-4. (120 aa)
DR999_PMT12388Sorbin and SH3 domain-containing protein 1. (538 aa)
DR999_PMT11021P2Y purinoceptor 12. (147 aa)
DR999_PMT14936RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (991 aa)
DR999_PMT15003Interleukin-27 receptor subunit alpha. (1218 aa)
DR999_PMT10794Cathelicidin-2-like. (210 aa)
DR999_PMT14320G patch domain-containing protein 8. (227 aa)
DR999_PMT16291DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family. (940 aa)
DR999_PMT15295Cytochrome c oxidase subunit 6A1, mitochondrial. (176 aa)
Your Current Organism:
Platysternon megacephalum
NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle
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