(10 nodes) VEGF ligand-receptor interactions network (Platysternon megacephalum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DR999_PMT06657	Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family. (353 aa)
	DR999_PMT17900	Vascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family. (249 aa)
	DR999_PMT07766	Vascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family. (210 aa)
	DR999_PMT06959	Collagen alpha-1(IV) chain; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1333 aa)
	DR999_PMT07401	Vascular endothelial growth factor receptor 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1381 aa)
	DR999_PMT04090	Cadherin EGF LAG seven-pass G-type receptor 3; Belongs to the PDGF/VEGF growth factor family. (165 aa)
	DR999_PMT04478	Anaphase-promoting complex subunit 16; Belongs to the PDGF/VEGF growth factor family. (215 aa)
	DR999_PMT01061	Oligophrenin-1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1333 aa)
	DR999_PMT01604	Kinesin-like protein KIF14; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1349 aa)
	DR999_PMT00479	Forkhead box protein D1-like; Belongs to the PDGF/VEGF growth factor family. (419 aa)

Your Current Organism:

Platysternon megacephalum

NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR999_PMT00479	DR999_PMT01061	A0A4D9FFL4	A0A4D9F4J9	Forkhead box protein D1-like; Belongs to the PDGF/VEGF growth factor family.	Oligophrenin-1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.971
DR999_PMT00479	DR999_PMT01604	A0A4D9FFL4	A0A4D9F652	Forkhead box protein D1-like; Belongs to the PDGF/VEGF growth factor family.	Kinesin-like protein KIF14; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.976
DR999_PMT00479	DR999_PMT04090	A0A4D9FFL4	A0A4D9EZC7	Forkhead box protein D1-like; Belongs to the PDGF/VEGF growth factor family.	Cadherin EGF LAG seven-pass G-type receptor 3; Belongs to the PDGF/VEGF growth factor family.	0.847
DR999_PMT00479	DR999_PMT04478	A0A4D9FFL4	A0A4D9F1J9	Forkhead box protein D1-like; Belongs to the PDGF/VEGF growth factor family.	Anaphase-promoting complex subunit 16; Belongs to the PDGF/VEGF growth factor family.	0.914
DR999_PMT00479	DR999_PMT06657	A0A4D9FFL4	A0A4D9ET13	Forkhead box protein D1-like; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family.	0.854
DR999_PMT00479	DR999_PMT06959	A0A4D9FFL4	A0A4D9ERE1	Forkhead box protein D1-like; Belongs to the PDGF/VEGF growth factor family.	Collagen alpha-1(IV) chain; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.971
DR999_PMT00479	DR999_PMT07401	A0A4D9FFL4	A0A4D9EV31	Forkhead box protein D1-like; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor receptor 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.994
DR999_PMT00479	DR999_PMT07766	A0A4D9FFL4	A0A4D9EMH0	Forkhead box protein D1-like; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family.	0.834
DR999_PMT00479	DR999_PMT17900	A0A4D9FFL4	A0A4D9DSX9	Forkhead box protein D1-like; Belongs to the PDGF/VEGF growth factor family.	Vascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family.	0.830
DR999_PMT01061	DR999_PMT00479	A0A4D9F4J9	A0A4D9FFL4	Oligophrenin-1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Forkhead box protein D1-like; Belongs to the PDGF/VEGF growth factor family.	0.971
DR999_PMT01061	DR999_PMT04090	A0A4D9F4J9	A0A4D9EZC7	Oligophrenin-1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Cadherin EGF LAG seven-pass G-type receptor 3; Belongs to the PDGF/VEGF growth factor family.	0.990
DR999_PMT01061	DR999_PMT04478	A0A4D9F4J9	A0A4D9F1J9	Oligophrenin-1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Anaphase-promoting complex subunit 16; Belongs to the PDGF/VEGF growth factor family.	0.924
DR999_PMT01061	DR999_PMT06657	A0A4D9F4J9	A0A4D9ET13	Oligophrenin-1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family.	0.908
DR999_PMT01061	DR999_PMT07401	A0A4D9F4J9	A0A4D9EV31	Oligophrenin-1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Vascular endothelial growth factor receptor 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.522
DR999_PMT01061	DR999_PMT07766	A0A4D9F4J9	A0A4D9EMH0	Oligophrenin-1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Vascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family.	0.936
DR999_PMT01061	DR999_PMT17900	A0A4D9F4J9	A0A4D9DSX9	Oligophrenin-1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Vascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family.	0.858
DR999_PMT01604	DR999_PMT00479	A0A4D9F652	A0A4D9FFL4	Kinesin-like protein KIF14; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Forkhead box protein D1-like; Belongs to the PDGF/VEGF growth factor family.	0.976
DR999_PMT01604	DR999_PMT04090	A0A4D9F652	A0A4D9EZC7	Kinesin-like protein KIF14; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Cadherin EGF LAG seven-pass G-type receptor 3; Belongs to the PDGF/VEGF growth factor family.	0.936
DR999_PMT01604	DR999_PMT04478	A0A4D9F652	A0A4D9F1J9	Kinesin-like protein KIF14; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Anaphase-promoting complex subunit 16; Belongs to the PDGF/VEGF growth factor family.	0.924
DR999_PMT01604	DR999_PMT06657	A0A4D9F652	A0A4D9ET13	Kinesin-like protein KIF14; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family.	0.944