(17 nodes) Carnitine metabolism network (Platysternon megacephalum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DR999_PMT00156	Cyclin-A2. (359 aa)
	DR999_PMT02575	RNA polymerase II subunit A C-terminal domain phosphatase SSU72. (1937 aa)
	DR999_PMT04006	Oxysterol-binding protein-related protein 1. (416 aa)
	DR999_PMT22125	Carnitine O-palmitoyltransferase 1, muscle isoform. (294 aa)
	DR999_PMT03782	Serine palmitoyltransferase 2. (2351 aa)
	DR999_PMT13838	Pancreatic alpha-amylase-like. (440 aa)
	DR999_PMT12528	Protein MB21D2. (423 aa)
	DR999_PMT05157	ATP-dependent RNA helicase DHX36; Belongs to the mitochondrial carrier (TC 2.A.29) family. (285 aa)
	DR999_PMT09938	Coiled-coil domain-containing protein 124. (464 aa)
	DR999_PMT07810	Disrupted in schizophrenia 1 protein. (166 aa)
	DR999_PMT11119	Protein mab-21-like 1. (359 aa)
	DR999_PMT12619	Protein mab-21-like 3. (363 aa)
	DR999_PMT21247	Carnitine O-palmitoyltransferase 1, liver isoform. (608 aa)
	DR999_PMT22646	Mitochondrial dynamics protein MID51. (209 aa)
	DR999_PMT19039	Carnitine O-palmitoyltransferase 1, liver isoform. (1146 aa)
	DR999_PMT00639	Soluble lamin-associated protein of 75 kDa; Belongs to the carnitine/choline acetyltransferase family. (666 aa)
	DR999_PMT02339	Mid1-interacting protein 1-B. (130 aa)

Your Current Organism:

Platysternon megacephalum

NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR999_PMT00156	DR999_PMT02339	A0A4D9F7F8	A0A4D9F8M1	Cyclin-A2.	Mid1-interacting protein 1-B.	0.712
DR999_PMT00639	DR999_PMT05157	A0A4D9F8S3	A0A4D9EJK1	Soluble lamin-associated protein of 75 kDa; Belongs to the carnitine/choline acetyltransferase family.	ATP-dependent RNA helicase DHX36; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.849
DR999_PMT00639	DR999_PMT19039	A0A4D9F8S3	A0A4D9DNE8	Soluble lamin-associated protein of 75 kDa; Belongs to the carnitine/choline acetyltransferase family.	Carnitine O-palmitoyltransferase 1, liver isoform.	0.852
DR999_PMT00639	DR999_PMT21247	A0A4D9F8S3	A0A4D9DI29	Soluble lamin-associated protein of 75 kDa; Belongs to the carnitine/choline acetyltransferase family.	Carnitine O-palmitoyltransferase 1, liver isoform.	0.854
DR999_PMT00639	DR999_PMT22125	A0A4D9F8S3	A0A4D9DFJ8	Soluble lamin-associated protein of 75 kDa; Belongs to the carnitine/choline acetyltransferase family.	Carnitine O-palmitoyltransferase 1, muscle isoform.	0.854
DR999_PMT02339	DR999_PMT00156	A0A4D9F8M1	A0A4D9F7F8	Mid1-interacting protein 1-B.	Cyclin-A2.	0.712
DR999_PMT02339	DR999_PMT04006	A0A4D9F8M1	A0A4D9EQ42	Mid1-interacting protein 1-B.	Oxysterol-binding protein-related protein 1.	0.712
DR999_PMT02339	DR999_PMT07810	A0A4D9F8M1	A0A4D9ECS4	Mid1-interacting protein 1-B.	Disrupted in schizophrenia 1 protein.	0.732
DR999_PMT02339	DR999_PMT09938	A0A4D9F8M1	A0A4D9EB18	Mid1-interacting protein 1-B.	Coiled-coil domain-containing protein 124.	0.712
DR999_PMT02339	DR999_PMT11119	A0A4D9F8M1	A0A4D9EII4	Mid1-interacting protein 1-B.	Protein mab-21-like 1.	0.712
DR999_PMT02339	DR999_PMT12528	A0A4D9F8M1	A0A4D9E8Y9	Mid1-interacting protein 1-B.	Protein MB21D2.	0.712
DR999_PMT02339	DR999_PMT12619	A0A4D9F8M1	A0A4D9E3M1	Mid1-interacting protein 1-B.	Protein mab-21-like 3.	0.712
DR999_PMT02339	DR999_PMT22646	A0A4D9F8M1	A0A4D9DL89	Mid1-interacting protein 1-B.	Mitochondrial dynamics protein MID51.	0.712
DR999_PMT02575	DR999_PMT03782	A0A4D9F3U4	A0A4D9ENF9	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	Serine palmitoyltransferase 2.	0.820
DR999_PMT02575	DR999_PMT19039	A0A4D9F3U4	A0A4D9DNE8	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	Carnitine O-palmitoyltransferase 1, liver isoform.	0.850
DR999_PMT02575	DR999_PMT21247	A0A4D9F3U4	A0A4D9DI29	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	Carnitine O-palmitoyltransferase 1, liver isoform.	0.845
DR999_PMT02575	DR999_PMT22125	A0A4D9F3U4	A0A4D9DFJ8	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	Carnitine O-palmitoyltransferase 1, muscle isoform.	0.788
DR999_PMT03782	DR999_PMT02575	A0A4D9ENF9	A0A4D9F3U4	Serine palmitoyltransferase 2.	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	0.820
DR999_PMT03782	DR999_PMT19039	A0A4D9ENF9	A0A4D9DNE8	Serine palmitoyltransferase 2.	Carnitine O-palmitoyltransferase 1, liver isoform.	0.763
DR999_PMT03782	DR999_PMT21247	A0A4D9ENF9	A0A4D9DI29	Serine palmitoyltransferase 2.	Carnitine O-palmitoyltransferase 1, liver isoform.	0.845