STRINGSTRING
DR999_PMT20068 DR999_PMT20068 DR999_PMT09985 DR999_PMT09985 DR999_PMT08763 DR999_PMT08763 DR999_PMT11270 DR999_PMT11270 DR999_PMT09845 DR999_PMT09845 DR999_PMT06769 DR999_PMT06769 DR999_PMT08014 DR999_PMT08014 DR999_PMT04026 DR999_PMT04026 DR999_PMT02999 DR999_PMT02999 DR999_PMT03292 DR999_PMT03292 DR999_PMT02169 DR999_PMT02169 DR999_PMT06060 DR999_PMT06060 DR999_PMT02246 DR999_PMT02246 DR999_PMT02189 DR999_PMT02189 DR999_PMT00056 DR999_PMT00056 DR999_PMT20554 DR999_PMT20554 DR999_PMT20062 DR999_PMT20062 DR999_PMT20061 DR999_PMT20061 DR999_PMT20071 DR999_PMT20071 DR999_PMT19669 DR999_PMT19669 DR999_PMT20064 DR999_PMT20064 DR999_PMT20058 DR999_PMT20058 DR999_PMT18562 DR999_PMT18562 DR999_PMT20055 DR999_PMT20055 DR999_PMT20069 DR999_PMT20069 DR999_PMT19228 DR999_PMT19228 DR999_PMT16329 DR999_PMT16329 DR999_PMT17817 DR999_PMT17817 DR999_PMT14240 DR999_PMT14240 DR999_PMT14257 DR999_PMT14257 DR999_PMT13986 DR999_PMT13986 DR999_PMT14214 DR999_PMT14214
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DR999_PMT20068ETS domain-containing transcription factor ERF; Belongs to the histone H2B family. (145 aa)
DR999_PMT09985Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
DR999_PMT08763Spermatid-associated protein; Belongs to the histone H2B family. (126 aa)
DR999_PMT11270RNA-binding protein 39. (303 aa)
DR999_PMT09845Histone H2B; Belongs to the histone H2B family. (126 aa)
DR999_PMT06769Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (868 aa)
DR999_PMT08014Ficolin-1-like. (255 aa)
DR999_PMT04026Rho GTPase-activating protein 28. (715 aa)
DR999_PMT02999Antizyme inhibitor 2. (568 aa)
DR999_PMT03292Importin subunit alpha; Belongs to the importin alpha family. (539 aa)
DR999_PMT02169Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
DR999_PMT06060RalBP1-associated Eps domain-containing protein 2. (877 aa)
DR999_PMT02246Glycolipid transfer protein; Belongs to the histone H2B family. (113 aa)
DR999_PMT02189Importin subunit alpha; Belongs to the importin alpha family. (478 aa)
DR999_PMT00056Histone H2A; Belongs to the histone H2A family. (223 aa)
DR999_PMT20554Histone H2B; Belongs to the histone H2B family. (121 aa)
DR999_PMT20062CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Belongs to the histone H2B family. (146 aa)
DR999_PMT20061Seizure 6-like protein 2; Belongs to the histone H2B family. (141 aa)
DR999_PMT20071Interferon-induced guanylate-binding protein 1; Belongs to the histone H2B family. (145 aa)
DR999_PMT19669Histone H2B; Belongs to the histone H2B family. (118 aa)
DR999_PMT20064Histone H2B type 1-P; Belongs to the histone H2B family. (144 aa)
DR999_PMT20058HIRA-interacting protein 3. (141 aa)
DR999_PMT18562GTP-binding protein Rit1; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (74 aa)
DR999_PMT20055Double C2-like domain-containing protein alpha; Belongs to the histone H2B family. (141 aa)
DR999_PMT20069Platelet-activating factor acetylhydrolase IB subunit gamma. (140 aa)
DR999_PMT19228Histone H2A; Belongs to the histone H2A family. (128 aa)
DR999_PMT16329Importin subunit alpha; Belongs to the importin alpha family. (538 aa)
DR999_PMT17817Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
DR999_PMT14240Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (107 aa)
DR999_PMT14257Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (156 aa)
DR999_PMT13986Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
DR999_PMT14214Histone H2B; Belongs to the histone H2B family. (126 aa)
Your Current Organism:
Platysternon megacephalum
NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle
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