(45 nodes) RNA Polymerase III Transcription network (Platysternon megacephalum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DR999_PMT13774	T-complex protein 1 subunit theta. (102 aa)
	DR999_PMT00795	Guanine nucleotide-binding protein subunit alpha-14. (334 aa)
	DR999_PMT00950	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2-like. (342 aa)
	DR999_PMT02996	Microtubule-actin cross-linking factor 1. (911 aa)
	DR999_PMT00597	V-type proton ATPase subunit S1-like protein. (2437 aa)
	DR999_PMT00395	Stress-associated endoplasmic reticulum protein 2. (681 aa)
	DR999_PMT02009	Heat shock factor protein 2. (409 aa)
	DR999_PMT00593	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (219 aa)
	DR999_PMT00893	Sodium-and chloride-dependent neutral and basic amino acid transporter B(0+). (203 aa)
	DR999_PMT06014	PAX-interacting protein 1. (352 aa)
	DR999_PMT03516	Tapasin-related protein-like. (93 aa)
	DR999_PMT03722	Protein O-mannosyl-transferase 2. (230 aa)
	DR999_PMT06687	Nuclear factor 1 A-type. (207 aa)
	DR999_PMT08319	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (314 aa)
	DR999_PMT06707	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (509 aa)
	DR999_PMT06999	HEAT repeat-containing protein 5B. (366 aa)
	DR999_PMT10483	Endonuclease V. (276 aa)
	DR999_PMT07714	DNA-directed RNA polymerases I and III subunit RPAC1. (260 aa)
	DR999_PMT09901	DNA-directed RNA polymerase III subunit RPC8. (206 aa)
	DR999_PMT09907	Kelch-like protein 26. (127 aa)
	DR999_PMT08831	Protein pelota-like protein. (415 aa)
	DR999_PMT10497	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (534 aa)
	DR999_PMT09713	Hemojuvelin. (2053 aa)
	DR999_PMT07947	Outer dense fiber protein 2. (186 aa)
	DR999_PMT12309	Trophoblast glycoprotein-like. (401 aa)
	DR999_PMT11935	Mitochondrial import inner membrane translocase subunit Tim8 A. (315 aa)
	DR999_PMT08589	Opsin-5-like. (1588 aa)
	DR999_PMT08933	Polypeptide N-acetylgalactosaminyltransferase 15. (401 aa)
	DR999_PMT10078	Histone deacetylase complex subunit SAP130. (301 aa)
	DR999_PMT09709	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
	DR999_PMT14888	Store-operated calcium entry-associated regulatory factor; Belongs to the type-B carboxylesterase/lipase family. (1091 aa)
	DR999_PMT10794	Cathelicidin-2-like. (210 aa)
	DR999_PMT13772	ATP synthase-coupling factor 6, mitochondrial. (428 aa)
	DR999_PMT12680	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1132 aa)
	DR999_PMT13841	Collagen alpha-1(XI) chain. (107 aa)
	DR999_PMT16455	MICAL-like protein 2. (235 aa)
	DR999_PMT14924	Peroxisomal biogenesis factor 5. (816 aa)
	DR999_PMT15553	Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (442 aa)
	DR999_PMT15604	F-box/WD repeat-containing protein 5. (747 aa)
	DR999_PMT17581	Inosine triphosphate pyrophosphatase. (636 aa)
	DR999_PMT16635	Dedicator of cytokinesis protein 2. (67 aa)
	DR999_PMT18877	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
	DR999_PMT21126	Pseudouridine synthase. (371 aa)
	DR999_PMT21736	DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
	DR999_PMT19889	PDZ domain-containing protein 4. (921 aa)

Your Current Organism:

Platysternon megacephalum

NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR999_PMT00395	DR999_PMT00593	A0A4D9F357	A0A4D9EYK0	Stress-associated endoplasmic reticulum protein 2.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.909
DR999_PMT00395	DR999_PMT00597	A0A4D9F357	A0A4D9F5T7	Stress-associated endoplasmic reticulum protein 2.	V-type proton ATPase subunit S1-like protein.	0.999
DR999_PMT00395	DR999_PMT00795	A0A4D9F357	A0A4D9FCD9	Stress-associated endoplasmic reticulum protein 2.	Guanine nucleotide-binding protein subunit alpha-14.	0.644
DR999_PMT00395	DR999_PMT02996	A0A4D9F357	A0A4D9F7C0	Stress-associated endoplasmic reticulum protein 2.	Microtubule-actin cross-linking factor 1.	0.996
DR999_PMT00395	DR999_PMT03516	A0A4D9F357	A0A4D9EXL3	Stress-associated endoplasmic reticulum protein 2.	Tapasin-related protein-like.	0.642
DR999_PMT00395	DR999_PMT03722	A0A4D9F357	A0A4D9EX14	Stress-associated endoplasmic reticulum protein 2.	Protein O-mannosyl-transferase 2.	0.978
DR999_PMT00395	DR999_PMT06014	A0A4D9F357	A0A4D9EXS5	Stress-associated endoplasmic reticulum protein 2.	PAX-interacting protein 1.	0.724
DR999_PMT00395	DR999_PMT06999	A0A4D9F357	A0A4D9ELQ1	Stress-associated endoplasmic reticulum protein 2.	HEAT repeat-containing protein 5B.	0.724
DR999_PMT00395	DR999_PMT07714	A0A4D9F357	A0A4D9EJT8	Stress-associated endoplasmic reticulum protein 2.	DNA-directed RNA polymerases I and III subunit RPAC1.	0.984
DR999_PMT00395	DR999_PMT07947	A0A4D9F357	A0A4D9EFC1	Stress-associated endoplasmic reticulum protein 2.	Outer dense fiber protein 2.	0.954
DR999_PMT00395	DR999_PMT08319	A0A4D9F357	A0A4D9EMM4	Stress-associated endoplasmic reticulum protein 2.	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	0.993
DR999_PMT00395	DR999_PMT08589	A0A4D9F357	A0A4D9EAV5	Stress-associated endoplasmic reticulum protein 2.	Opsin-5-like.	0.659
DR999_PMT00395	DR999_PMT08933	A0A4D9F357	A0A4D9EAI8	Stress-associated endoplasmic reticulum protein 2.	Polypeptide N-acetylgalactosaminyltransferase 15.	0.975
DR999_PMT00395	DR999_PMT09709	A0A4D9F357	A0A4D9E8H8	Stress-associated endoplasmic reticulum protein 2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.958
DR999_PMT00395	DR999_PMT09713	A0A4D9F357	A0A4D9EFK2	Stress-associated endoplasmic reticulum protein 2.	Hemojuvelin.	0.906
DR999_PMT00395	DR999_PMT09901	A0A4D9F357	A0A4D9EJ35	Stress-associated endoplasmic reticulum protein 2.	DNA-directed RNA polymerase III subunit RPC8.	0.975
DR999_PMT00395	DR999_PMT09907	A0A4D9F357	A0A4D9EHM1	Stress-associated endoplasmic reticulum protein 2.	Kelch-like protein 26.	0.964
DR999_PMT00395	DR999_PMT10078	A0A4D9F357	A0A4D9E9G8	Stress-associated endoplasmic reticulum protein 2.	Histone deacetylase complex subunit SAP130.	0.987
DR999_PMT00395	DR999_PMT10483	A0A4D9F357	A0A4D9EJZ0	Stress-associated endoplasmic reticulum protein 2.	Endonuclease V.	0.909
DR999_PMT00395	DR999_PMT10497	A0A4D9F357	A0A4D9EGU4	Stress-associated endoplasmic reticulum protein 2.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.983