STRINGSTRING
DR999_PMT15295 DR999_PMT15295 DR999_PMT16291 DR999_PMT16291 DR999_PMT14320 DR999_PMT14320 DR999_PMT10794 DR999_PMT10794 DR999_PMT15003 DR999_PMT15003 DR999_PMT14936 DR999_PMT14936 DR999_PMT11021 DR999_PMT11021 DR999_PMT11042 DR999_PMT11042 DR999_PMT12310 DR999_PMT12310 DR999_PMT10459 DR999_PMT10459 DR999_PMT13953 DR999_PMT13953 DR999_PMT12388 DR999_PMT12388 DR999_PMT12994 DR999_PMT12994 DR999_PMT12178 DR999_PMT12178 DR999_PMT09907 DR999_PMT09907 DR999_PMT08725 DR999_PMT08725 DR999_PMT08385 DR999_PMT08385 DR999_PMT17010 DR999_PMT17010 DR999_PMT14968 DR999_PMT14968 DR999_PMT17576 DR999_PMT17576 DR999_PMT14644 DR999_PMT14644 DR999_PMT18585 DR999_PMT18585 DR999_PMT19346 DR999_PMT19346 DR999_PMT20261 DR999_PMT20261 DR999_PMT17911 DR999_PMT17911 DR999_PMT17432 DR999_PMT17432 DR999_PMT16635 DR999_PMT16635 DR999_PMT16382 DR999_PMT16382 DR999_PMT13244 DR999_PMT13244 DR999_PMT17503 DR999_PMT17503 DR999_PMT16808 DR999_PMT16808 DR999_PMT18877 DR999_PMT18877 DR999_PMT19416 DR999_PMT19416 DR999_PMT17612 DR999_PMT17612 DR999_PMT06616 DR999_PMT06616 DR999_PMT09446 DR999_PMT09446 DR999_PMT04891 DR999_PMT04891 DR999_PMT06705 DR999_PMT06705 DR999_PMT08770 DR999_PMT08770 DR999_PMT03312 DR999_PMT03312 DR999_PMT02542 DR999_PMT02542 DR999_PMT06819 DR999_PMT06819 DR999_PMT05375 DR999_PMT05375 DR999_PMT03744 DR999_PMT03744 DR999_PMT01672 DR999_PMT01672 DR999_PMT03429 DR999_PMT03429 DR999_PMT00595 DR999_PMT00595 DR999_PMT01252 DR999_PMT01252 DR999_PMT05862 DR999_PMT05862 DR999_PMT01347 DR999_PMT01347 DR999_PMT00522 DR999_PMT00522 DR999_PMT01199 DR999_PMT01199 DR999_PMT00269 DR999_PMT00269 DR999_PMT00300 DR999_PMT00300 DR999_PMT00563 DR999_PMT00563 DR999_PMT00900 DR999_PMT00900 DR999_PMT00422 DR999_PMT00422 DR999_PMT21736 DR999_PMT21736 DR999_PMT19523 DR999_PMT19523 DR999_PMT19241 DR999_PMT19241 DR999_PMT16941 DR999_PMT16941 DR999_PMT19367 DR999_PMT19367 DR999_PMT20134 DR999_PMT20134 DR999_PMT20577 DR999_PMT20577 DR999_PMT22865 DR999_PMT22865 DR999_PMT20226 DR999_PMT20226 DR999_PMT21676 DR999_PMT21676 DR999_PMT21366 DR999_PMT21366 DR999_PMT22388 DR999_PMT22388 DR999_PMT23617 DR999_PMT23617 DR999_PMT22490 DR999_PMT22490 DR999_PMT22601 DR999_PMT22601 DR999_PMT24050 DR999_PMT24050
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DR999_PMT15295Cytochrome c oxidase subunit 6A1, mitochondrial. (176 aa)
DR999_PMT16291DNA-directed RNA polymerase II subunit RPB2; Belongs to the RNA polymerase beta chain family. (940 aa)
DR999_PMT14320G patch domain-containing protein 8. (227 aa)
DR999_PMT10794Cathelicidin-2-like. (210 aa)
DR999_PMT15003Interleukin-27 receptor subunit alpha. (1218 aa)
DR999_PMT14936RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (991 aa)
DR999_PMT11021P2Y purinoceptor 12. (147 aa)
DR999_PMT11042Ras-related protein Rap-2b. (769 aa)
DR999_PMT12310Protein Wnt-11. (359 aa)
DR999_PMT10459Transcription elongation factor B polypeptide 3. (611 aa)
DR999_PMT13953Bis(5'-nucleosyl)-tetraphosphatase. (778 aa)
DR999_PMT12388Sorbin and SH3 domain-containing protein 1. (538 aa)
DR999_PMT12994Anoctamin-4. (120 aa)
DR999_PMT12178Purine-rich element-binding protein gamma. (305 aa)
DR999_PMT09907Kelch-like protein 26. (127 aa)
DR999_PMT08725Histone-lysine N-methyltransferase SETDB2. (351 aa)
DR999_PMT08385Cytosolic 5'-nucleotidase 3A. (522 aa)
DR999_PMT17010Protein ENL. (552 aa)
DR999_PMT14968Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial. (660 aa)
DR999_PMT17576Mucin-19-like. (1176 aa)
DR999_PMT14644Receptor-type tyrosine-protein phosphatase kappa-like; Belongs to the cyclin family. (748 aa)
DR999_PMT18585Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
DR999_PMT19346FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (555 aa)
DR999_PMT20261Histone-lysine N-methyltransferase PRDM9-like. (164 aa)
DR999_PMT17911Eukaryotic translation initiation factor 4 gamma 3. (735 aa)
DR999_PMT17432Zinc finger CCCH domain-containing protein 18. (305 aa)
DR999_PMT16635Dedicator of cytokinesis protein 2. (67 aa)
DR999_PMT16382Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (516 aa)
DR999_PMT13244Mannose-6-phosphate isomerase; Belongs to the SKP1 family. (112 aa)
DR999_PMT17503Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1722 aa)
DR999_PMT16808Coronin-1B. (102 aa)
DR999_PMT18877DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
DR999_PMT19416DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (103 aa)
DR999_PMT17612E3 ubiquitin-protein ligase NEURL3. (275 aa)
DR999_PMT06616Sorting nexin-13. (362 aa)
DR999_PMT09446Laminin subunit beta-4. (285 aa)
DR999_PMT04891Fibroblast growth factor 3. (188 aa)
DR999_PMT0670539S ribosomal protein L22. (208 aa)
DR999_PMT08770Cysteinyl leukotriene receptor 2. (577 aa)
DR999_PMT03312Transcription elongation factor A protein 3. (575 aa)
DR999_PMT02542Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3. (307 aa)
DR999_PMT06819Zinc finger MIZ domain-containing protein 1-like. (523 aa)
DR999_PMT05375Copine-3. (482 aa)
DR999_PMT03744DNA-directed RNA polymerase II subunit RPB11-a. (117 aa)
DR999_PMT01672Sodium channel protein type 3 subunit alpha. (531 aa)
DR999_PMT03429CUE domain-containing protein 1. (863 aa)
DR999_PMT00595Cyclin-H; Belongs to the cyclin family. (328 aa)
DR999_PMT01252Mitotic checkpoint serine/threonine-protein kinase BUB1 beta. (407 aa)
DR999_PMT05862Neuropeptide W. (1166 aa)
DR999_PMT01347Oxysterols receptor LXR-alpha. (670 aa)
DR999_PMT00522General transcription factor IIH subunit. (395 aa)
DR999_PMT01199Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (194 aa)
DR999_PMT00269General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (262 aa)
DR999_PMT00300Protocadherin Fat 1; Belongs to the cyclin family. (577 aa)
DR999_PMT00563Splicing regulatory glutamine/lysine-rich protein 1; Belongs to the protein kinase superfamily. (383 aa)
DR999_PMT00900Potassium voltage-gated channel subfamily C member 1-like. (576 aa)
DR999_PMT00422Cyclin-dependent kinase 2-interacting protein. (211 aa)
DR999_PMT21736DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
DR999_PMT19523CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
DR999_PMT19241RNA polymerase II-associated factor 1-like protein. (511 aa)
DR999_PMT16941C-C motif chemokine 13-like. (65 aa)
DR999_PMT19367Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13. (232 aa)
DR999_PMT20134Transcription elongation factor SPT5. (1182 aa)
DR999_PMT20577Butyrophilin subfamily 1 member A1-like. (172 aa)
DR999_PMT22865Elongation factor Tu. (130 aa)
DR999_PMT20226Y-box-binding protein 2. (795 aa)
DR999_PMT21676FACT complex subunit SPT16. (806 aa)
DR999_PMT21366General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (460 aa)
DR999_PMT22388DNA-directed RNA polymerase II subunit RPB1. (386 aa)
DR999_PMT236172-alkenal reductase. (92 aa)
DR999_PMT22490KDEL motif-containing protein 1-like. (94 aa)
DR999_PMT22601Ornithine cyclodeaminase. (81 aa)
DR999_PMT24050Perforin-1. (179 aa)
Your Current Organism:
Platysternon megacephalum
NCBI taxonomy Id: 55544
Other names: P. megacephalum, Platysternon macrocephalus, big-headed turtle
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