STRINGSTRING
PFK1 PFK1 GPI_2 GPI_2 GPI_3 GPI_3 PFK_1 PFK_1 PFK_2 PFK_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PFK1Pyrophosphate-dependent phosphofructose kinase. (564 aa)
GPI_2Glucose-6-phosphate isomerase; Belongs to the GPI family. (601 aa)
GPI_3Glucose-6-phosphate isomerase; Belongs to the GPI family. (786 aa)
PFK_1Pyrophosphate-dependent phosphofructose kinase. (563 aa)
PFK_2Phosphofructokinase. (515 aa)
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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