(97 nodes) Protein localization to organelle network (Phaeodactylum tricornutum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B7FY51_PHATC	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (306 aa)
	PHATR_13417	Predicted protein. (510 aa)
	PHATR_43900	Predicted protein. (882 aa)
	PHATR_18533	Predicted protein. (172 aa)
	PHATR_33394	Predicted protein. (175 aa)
	PHATR_5873	Predicted protein. (186 aa)
	B7FP04_PHATC	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (220 aa)
	B7FP09_PHATC	Predicted protein. (897 aa)
	B7FPQ8_PHATC	Predicted protein. (321 aa)
	B7FPU4_PHATC	Predicted protein. (664 aa)
	B7FQA6_PHATC	Predicted protein. (229 aa)
	AP3delta	Predicted protein. (1277 aa)
	B7FQF0_PHATC	Predicted protein. (575 aa)
	B7FQM2_PHATC	Predicted protein. (1740 aa)
	B7FQV9_PHATC	Predicted protein. (73 aa)
	B7FR12_PHATC	Predicted protein. (2704 aa)
	B7FR31_PHATC	Predicted protein. (84 aa)
	B7FRQ3_PHATC	Predicted protein. (245 aa)
	B7FRY1_PHATC	Predicted protein. (302 aa)
	B7FSN9_PHATC	Predicted protein. (800 aa)
	B7FT10_PHATC	Predicted protein. (425 aa)
	B7FT22_PHATC	Predicted protein. (251 aa)
	B7FT56_PHATC	Predicted protein. (2800 aa)
	B7FTS5_PHATC	Predicted protein. (386 aa)
	B7FTT7_PHATC	Predicted protein. (510 aa)
	B7FU41_PHATC	Predicted protein. (210 aa)
	B7FU64_PHATC	Predicted protein. (447 aa)
	B7FUF4_PHATC	Predicted protein. (417 aa)
	B7FUH2_PHATC	Predicted protein. (3905 aa)
	B7FUN2_PHATC	Predicted protein. (130 aa)
	B7FUS5_PHATC	Predicted protein. (671 aa)
	B7FV98_PHATC	Predicted protein. (480 aa)
	B7FVE6_PHATC	Predicted protein. (1053 aa)
	B7FVI7_PHATC	Predicted protein. (500 aa)
	EB1	Predicted protein. (256 aa)
	B7FVS9_PHATC	Predicted protein. (167 aa)
	B7FWQ6_PHATC	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (202 aa)
	B7FWR5_PHATC	Predicted protein. (314 aa)
	B7FX44_PHATC	Predicted protein. (237 aa)
	B7FX95_PHATC	Predicted protein. (1451 aa)
	B7FXT4_PHATC	Predicted protein. (448 aa)
	B7FY57_PHATC	Predicted protein. (1849 aa)
	B7FY65_PHATC	Predicted protein. (181 aa)
	B7FYJ2_PHATC	Predicted protein. (127 aa)
	B7FYQ6_PHATC	Predicted protein. (275 aa)
	B7FZ52_PHATC	Predicted protein. (1242 aa)
	B7FZB5_PHATC	Predicted protein. (202 aa)
	B7G062_PHATC	Predicted protein. (1007 aa)
	B7G0I3_PHATC	Predicted protein. (97 aa)
	B7G0M2_PHATC	Predicted protein. (67 aa)
	B7G0V2_PHATC	Predicted protein. (206 aa)
	Albino3	Predicted protein. (467 aa)
	B7G183_PHATC	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1030 aa)
	B7G1N0_PHATC	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (270 aa)
	B7G1N5_PHATC	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (270 aa)
	B7G1P0_PHATC	Predicted protein; Belongs to the AAA ATPase family. (821 aa)
	B7G2F8_PHATC	Predicted protein. (324 aa)
	B7G303_PHATC	Predicted protein. (227 aa)
	Spc12	Signal peptidase 12 kDa subunit. (78 aa)
	B7G373_PHATC	Predicted protein. (276 aa)
	B7G383_PHATC	Nuclear pore protein. (829 aa)
	B7G3I0_PHATC	Predicted protein. (976 aa)
	B7G3J4_PHATC	Predicted protein. (640 aa)
	B7G3L0_PHATC	Predicted protein. (313 aa)
	B7G3N1_PHATC	Predicted protein. (403 aa)
	B7G496_PHATC	Predicted protein. (308 aa)
	B7G4J1_PHATC	Predicted protein. (311 aa)
	B7G5B4_PHATC	Predicted protein; Belongs to the AAA ATPase family. (172 aa)
	B7G5I4_PHATC	Importin subunit alpha; Belongs to the importin alpha family. (544 aa)
	B7G5J2_PHATC	Predicted protein. (4524 aa)
	B7G5N4_PHATC	Predicted protein. (411 aa)
	B7G5P8_PHATC	Predicted protein. (298 aa)
	B7G6K5_PHATC	Importin subunit alpha; Belongs to the importin alpha family. (577 aa)
	B7G6L3_PHATC	Predicted protein. (190 aa)
	B7G738_PHATC	Predicted protein. (571 aa)
	B7G7I1_PHATC	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. (688 aa)
	B7G7Z6_PHATC	Predicted protein. (636 aa)
	B7G8K6_PHATC	ER membrane protein complex subunit 3; Belongs to the EMC3 family. (288 aa)
	B7G8L0_PHATC	Predicted protein. (368 aa)
	B7G8T5_PHATC	Predicted protein. (871 aa)
	B7G8T6_PHATC	Predicted protein. (191 aa)
	B7G916_PHATC	Predicted protein. (441 aa)
	B7G933_PHATC	ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...] (349 aa)
	B7GA68_PHATC	Predicted protein. (1592 aa)
	B7GAH4_PHATC	Predicted protein. (415 aa)
	B7GB69_PHATC	Predicted protein. (198 aa)
	B7GC72_PHATC	Predicted protein. (764 aa)
	B7GCJ9_PHATC	Predicted protein. (120 aa)
	B7GCP5_PHATC	Predicted protein. (523 aa)
	B7GCX0_PHATC	Predicted protein. (214 aa)
	B7GD31_PHATC	Sister chromatid cohesion protein. (1699 aa)
	Sec61alpha	Transport protein Sec61 alpha subunit; Belongs to the SecY/SEC61-alpha family. (559 aa)
	B7GD52_PHATC	Predicted protein. (1494 aa)
	B7GEQ9_PHATC	Predicted protein. (382 aa)
	B7S3J3_PHATC	Predicted protein. (144 aa)
	B7S3X0_PHATC	Predicted protein. (125 aa)
	B7S4H8_PHATC	Predicted protein. (93 aa)

Your Current Organism:

Phaeodactylum tricornutum

NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP3delta	B7FX95_PHATC	B7FQE6	B7FX95	Predicted protein.	Predicted protein.	0.796
AP3delta	B7FY51_PHATC	B7FQE6	B7FY51	Predicted protein.	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	0.511
Albino3	Sec61alpha	B7G144	B7GD39	Predicted protein.	Transport protein Sec61 alpha subunit; Belongs to the SecY/SEC61-alpha family.	0.658
B7FP04_PHATC	B7FR31_PHATC	B7FP04	B7FR31	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Predicted protein.	0.698
B7FP04_PHATC	B7FRQ3_PHATC	B7FP04	B7FRQ3	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Predicted protein.	0.972
B7FP04_PHATC	B7FTT7_PHATC	B7FP04	B7FTT7	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Predicted protein.	0.875
B7FP04_PHATC	B7FU64_PHATC	B7FP04	B7FU64	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Predicted protein.	0.574
B7FP04_PHATC	B7FUN2_PHATC	B7FP04	B7FUN2	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Predicted protein.	0.915
B7FP04_PHATC	B7FVI7_PHATC	B7FP04	B7FVI7	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Predicted protein.	0.491
B7FP04_PHATC	B7FZB5_PHATC	B7FP04	B7FZB5	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Predicted protein.	0.997
B7FP04_PHATC	B7G0M2_PHATC	B7FP04	B7G0M2	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Predicted protein.	0.775
B7FP04_PHATC	B7G3J4_PHATC	B7FP04	B7G3J4	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Predicted protein.	0.710
B7FP04_PHATC	B7G5N4_PHATC	B7FP04	B7G5N4	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Predicted protein.	0.926
B7FP04_PHATC	B7G8L0_PHATC	B7FP04	B7G8L0	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Predicted protein.	0.481
B7FP04_PHATC	B7G916_PHATC	B7FP04	B7G916	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Predicted protein.	0.491
B7FP04_PHATC	B7S3X0_PHATC	B7FP04	B7S3X0	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Predicted protein.	0.977
B7FP09_PHATC	B7FVE6_PHATC	B7FP09	B7FVE6	Predicted protein.	Predicted protein.	0.630
B7FP09_PHATC	B7G062_PHATC	B7FP09	B7G062	Predicted protein.	Predicted protein.	0.621
B7FP09_PHATC	B7G0V2_PHATC	B7FP09	B7G0V2	Predicted protein.	Predicted protein.	0.481
B7FP09_PHATC	B7G7Z6_PHATC	B7FP09	B7G7Z6	Predicted protein.	Predicted protein.	0.635