STRINGSTRING
B7FR46_PHATC B7FR46_PHATC petB petB petC petC Prk Prk FBPC1 FBPC1 SBPase SBPase FBPC2 FBPC2 FBPC3 FBPC3 TPI/GapC3 TPI/GapC3 GapC4 GapC4 RNAse-H RNAse-H B7FTZ4_PHATC B7FTZ4_PHATC FBPC4 FBPC4 Tkl Tkl TIM_1 TIM_1 B7G5G4_PHATC B7G5G4_PHATC GapC1 GapC1 B7G5R3_PHATC B7G5R3_PHATC B7G6H0_PHATC B7G6H0_PHATC GapC2a GapC2a PEPCase_2 PEPCase_2 PGK PGK AAT_1 AAT_1 PEPCK1 PEPCK1 FBP FBP GAPDH_3 GAPDH_3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B7FR46_PHATCEukaryotic translation initiation factor 5A. (158 aa)
petBCytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (215 aa)
petCCytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (217 aa)
PrkPhosphoribulokinase. (396 aa)
FBPC1Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (427 aa)
SBPaseSeduheptulose bisphosphatase. (356 aa)
FBPC2Plastidic inositol phosphatase; Belongs to the FBPase class 1 family. (420 aa)
FBPC3Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (418 aa)
TPI/GapC3Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (614 aa)
GapC4Glyceraldehyde-3-phosphate dehydrogenase. (336 aa)
RNAse-HPredicted protein. (190 aa)
B7FTZ4_PHATCTransport protein. (562 aa)
FBPC4Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (457 aa)
TklTransketolase. (711 aa)
TIM_1Triosephosphate isomerase. (268 aa)
B7G5G4_PHATCPhosphoglycerate kinase. (441 aa)
GapC1Glyceraldehyde-3-phosphate dehydrogenase. (379 aa)
B7G5R3_PHATCTransketolase. (684 aa)
B7G6H0_PHATCPhosphoglycerate kinase. (436 aa)
GapC2aGlyceraldehyde-3-phosphate dehydrogenase. (334 aa)
PEPCase_2Predicted protein. (877 aa)
PGKPhosphoglycerate kinase. (448 aa)
AAT_1Aspartate transaminase. (435 aa)
PEPCK1Phosphoenolpyruvate carboxykinase. (612 aa)
FBPFructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (341 aa)
GAPDH_3Glyceraldehyde-3-phosphate dehydrogenase. (351 aa)
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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