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B7FS76_PHATC B7FS76_PHATC B7FSQ0_PHATC B7FSQ0_PHATC EPSPsy EPSPsy B7FT67_PHATC B7FT67_PHATC PGAM_6 PGAM_6 Tkl Tkl PGAM_7 PGAM_7 FSA FSA TIM_1 TIM_1 PGK PGK FbaC2 FbaC2 TufA TufA B7GAC8_PHATC B7GAC8_PHATC sufD sufD B7GCG9_PHATC B7GCG9_PHATC GluRS_2 GluRS_2 TAL TAL PGAM_4 PGAM_4 rbcL rbcL rpl11 rpl11 PGAM_2 PGAM_2 rpl33 rpl33 rpoB rpoB rpoC1 rpoC1 rpoC2 rpoC2 rps2 rps2 rbcS rbcS sufB sufB sufC sufC rpl32 rpl32 groL groL rpl36 rpl36 rpoA rpoA tufA tufA clpC clpC PHATR_28222 PHATR_28222 PGAM_3 PGAM_3 Prk Prk PGAM_1 PGAM_1 CPN60_1 CPN60_1 tatC tatC CPN60_2 CPN60_2 petF petF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B7FS76_PHATCChorismate synthase. (442 aa)
B7FSQ0_PHATCTriosephosphate isomerase. (298 aa)
EPSPsy3-phosphoshikimate 1-carboxyvinyltransferase. (483 aa)
B7FT67_PHATCTriosephosphate isomerase. (290 aa)
PGAM_6Phosphoglycerate mutase. (282 aa)
TklTransketolase. (711 aa)
PGAM_7Phosphoglycerate mutase. (357 aa)
FSAAldolase fructose-6-phosphate-aldolase. (266 aa)
TIM_1Triosephosphate isomerase. (268 aa)
PGKPhosphoglycerate kinase. (448 aa)
FbaC2Fructose-1,6-bisphosphate aldolase. (439 aa)
TufAPredicted protein. (426 aa)
B7GAC8_PHATCPredicted protein. (277 aa)
sufDFeS assembly protein suf. (690 aa)
B7GCG9_PHATCPyrophosphate--fructose 6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. (418 aa)
GluRS_2Glutamyl-trna synthase; Belongs to the class-I aminoacyl-tRNA synthetase family. (588 aa)
TALTransaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (399 aa)
PGAM_4Phosphoglycerate mutase. (306 aa)
rbcLRibulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. (490 aa)
rpl1150S ribosomal protein L11, chloroplastic; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa)
PGAM_2Phosphoglycerate mutase. (539 aa)
rpl3350S ribosomal protein L33, chloroplastic. (64 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1389 aa)
rpoC1DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily. (696 aa)
rpoC2DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1415 aa)
rps230S ribosomal protein S2, chloroplastic. (226 aa)
rbcSRibulose-1,5-bisphosphate carboxylase/oxygenase small subunit. (139 aa)
sufBIron-sulfur cluster formation ABC transporter. (486 aa)
sufCIron-sulfur cluster formation ABC transporter ATP-binding subunit. (252 aa)
rpl3250S ribosomal protein L32, chloroplastic. (55 aa)
groL60 kDa chaperonin, chloroplastic; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (533 aa)
rpl3650S ribosomal protein L36, chloroplastic. (37 aa)
rpoADNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (311 aa)
tufAElongation factor Tu, chloroplastic; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (409 aa)
clpCATP-dependent clp protease ATP-binding subunit; Belongs to the ClpA/ClpB family. (926 aa)
PHATR_28222Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (316 aa)
PGAM_3Phosphoglycerate mutase. (476 aa)
PrkPhosphoribulokinase. (396 aa)
PGAM_1Phosphoglycerate mutase. (888 aa)
CPN60_1Mitochondria-targeted chaperonin; Belongs to the chaperonin (HSP60) family. (579 aa)
tatCSec-independent protein translocase component TatC. (246 aa)
CPN60_2Nuclear-encoded-like protein of chloroplast gro; Belongs to the chaperonin (HSP60) family. (580 aa)
petFFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (99 aa)
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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