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PPdK PPdK B7G5R1_PHATC B7G5R1_PHATC GDCP GDCP B7G620_PHATC B7G620_PHATC B7G6E5_PHATC B7G6E5_PHATC GLNA GLNA PGK PGK B7G9P5_PHATC B7G9P5_PHATC PEPCK1 PEPCK1 PDHA1 PDHA1 FBP FBP Lhcr10 Lhcr10 GPI_1 GPI_1 GPI_2 GPI_2 TAL TAL GPI_3 GPI_3 GDCT GDCT rbcL rbcL B7FPL4_PHATC B7FPL4_PHATC FBPC1 FBPC1 Lhcr4 Lhcr4 FBPC3 FBPC3 atpB-2 atpB-2 B7FSQ0_PHATC B7FSQ0_PHATC B7FT67_PHATC B7FT67_PHATC FBPC4 FBPC4 PsbO PsbO PDHB1 PDHB1 GDCT_1 GDCT_1 FSA FSA TIM_1 TIM_1 B7G5A1_PHATC B7G5A1_PHATC psbC psbC psbD psbD psbE psbE psbF psbF psbH psbH psbB psbB psaM psaM petD petD psaD psaD psbV psbV petF petF atpB atpB rbcS rbcS psaE psaE psbA psbA psaC psaC psaA psaA psaJ psaJ psaF psaF psaL psaL psaB psaB petC petC PHATR_28222 PHATR_28222 SHMT SHMT Prk Prk
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PPdKPredicted protein. (1011 aa)
B7G5R1_PHATCDehydrogenase. (392 aa)
GDCPGlycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1005 aa)
B7G620_PHATCIsocitrate dehydrogenase. (357 aa)
B7G6E5_PHATC6-phosphogluconolactonase. (278 aa)
GLNAGLNA, glutamine synthase; Belongs to the glutamine synthetase family. (716 aa)
PGKPhosphoglycerate kinase. (448 aa)
B7G9P5_PHATCCitrate synthase; Belongs to the citrate synthase family. (471 aa)
PEPCK1Phosphoenolpyruvate carboxykinase. (612 aa)
PDHA1Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (413 aa)
FBPFructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (341 aa)
Lhcr10Protein fucoxanthin chlorophyll a/c protein. (232 aa)
GPI_1Glucose-6-phosphate isomerase; Belongs to the GPI family. (554 aa)
GPI_2Glucose-6-phosphate isomerase; Belongs to the GPI family. (601 aa)
TALTransaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (399 aa)
GPI_3Glucose-6-phosphate isomerase; Belongs to the GPI family. (786 aa)
GDCTAminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (421 aa)
rbcLRibulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. (490 aa)
B7FPL4_PHATC6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (276 aa)
FBPC1Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (427 aa)
Lhcr4Protein fucoxanthin chlorophyll a/c protein. (215 aa)
FBPC3Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (418 aa)
atpB-2ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (501 aa)
B7FSQ0_PHATCTriosephosphate isomerase. (298 aa)
B7FT67_PHATCTriosephosphate isomerase. (290 aa)
FBPC4Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (457 aa)
PsbOOxygen-evolving enhancer protein 1. (308 aa)
PDHB1Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (360 aa)
GDCT_1Glycine decarboxylase t-protein. (854 aa)
FSAAldolase fructose-6-phosphate-aldolase. (266 aa)
TIM_1Triosephosphate isomerase. (268 aa)
B7G5A1_PHATCGlutamine synthetase. (416 aa)
psbCPhotosystem II CP43 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbC subfamily. (471 aa)
psbDPhotosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. (351 aa)
psbECytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (84 aa)
psbFCytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (43 aa)
psbHPhotosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (67 aa)
psbBPhotosystem II CP47 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily. (509 aa)
psaMPhotosystem I reaction center subunit XII. (30 aa)
petDCytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (160 aa)
psaDPhotosystem I ferredoxin-binding protein. (139 aa)
psbVCytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II. (163 aa)
petFFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (99 aa)
atpBATP synthase subunit beta, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (475 aa)
rbcSRibulose-1,5-bisphosphate carboxylase/oxygenase small subunit. (139 aa)
psaEPhotosystem I reaction center subunit IV; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family. (69 aa)
psbAPhotosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (360 aa)
psaCPhotosystem I iron-sulfur center; Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized accepto [...] (81 aa)
psaAPhotosystem I P700 chlorophyll a apoprotein A1; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6. (752 aa)
psaJPhotosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family. (41 aa)
psaFPhotosystem I protein F. (185 aa)
psaLPhotosystem I reaction center subunit XI. (151 aa)
psaBPhotosystem I P700 chlorophyll a apoprotein A2; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6. (733 aa)
petCCytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (217 aa)
PHATR_28222Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (316 aa)
SHMTSerine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (473 aa)
PrkPhosphoribulokinase. (396 aa)
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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