STRINGSTRING
GapC1 GapC1 B7G5R1_PHATC B7G5R1_PHATC B7G627_PHATC B7G627_PHATC B7G6H0_PHATC B7G6H0_PHATC GLNA GLNA PEPCase_2 PEPCase_2 ACC1 ACC1 GOX GOX B7G7W5_PHATC B7G7W5_PHATC PGK PGK B7G963_PHATC B7G963_PHATC B7G9P5_PHATC B7G9P5_PHATC PEPCK1 PEPCK1 PYC2 PYC2 FBP FBP B7GB64_PHATC B7GB64_PHATC B7GBF1_PHATC B7GBF1_PHATC PYC1 PYC1 PDS2 PDS2 FABB FABB DHLTA_3 DHLTA_3 AAT_2 AAT_2 GPI_1 GPI_1 TAL TAL UGP/PGM UGP/PGM FbaC5 FbaC5 ACC2 ACC2 B7GEG8_PHATC B7GEG8_PHATC MDH MDH PGAM_4 PGAM_4 GDCT GDCT B7GEF2_PHATC B7GEF2_PHATC chlI chlI psaD psaD rbcS rbcS cbbX cbbX PHATR_50995 PHATR_50995 PHATR_28222 PHATR_28222 PHATR_21116 PHATR_21116 PDS-like1 PDS-like1 SHMT SHMT Prk Prk UGDH1 UGDH1 SDH1 SDH1 B7FP19_PHATC B7FP19_PHATC B7FPN7_PHATC B7FPN7_PHATC SHMT2 SHMT2 B7FQX6_PHATC B7FQX6_PHATC Lhcx2 Lhcx2 Fba4 Fba4 B7FRX6_PHATC B7FRX6_PHATC ME1 ME1 FABI FABI GapC4 GapC4 B7FSQ0_PHATC B7FSQ0_PHATC GDCH GDCH B7FT67_PHATC B7FT67_PHATC B7FTR6_PHATC B7FTR6_PHATC B7FTX1_PHATC B7FTX1_PHATC PGAM_6 PGAM_6 B7FU89_PHATC B7FU89_PHATC B7FUG8_PHATC B7FUG8_PHATC B7FUR4_PHATC B7FUR4_PHATC VDE VDE FBPC4 FBPC4 Tkl Tkl B7FV31_PHATC B7FV31_PHATC B7FVA8_PHATC B7FVA8_PHATC hemC hemC B7FXA2_PHATC B7FXA2_PHATC 6PGDH 6PGDH ACS4 ACS4 ACS1 ACS1 ACL ACL PDH1 PDH1 PK4b PK4b PDS1 PDS1 PDHB1 PDHB1 B7FZZ1_PHATC B7FZZ1_PHATC Cbs Cbs SCS-alpha SCS-alpha B7G128_PHATC B7G128_PHATC FSA FSA FABG FABG B7G275_PHATC B7G275_PHATC TIM_1 TIM_1 FABD FABD Fba3 Fba3 PPdK PPdK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GapC1Glyceraldehyde-3-phosphate dehydrogenase. (379 aa)
B7G5R1_PHATCDehydrogenase. (392 aa)
B7G627_PHATCArginase; Belongs to the arginase family. (301 aa)
B7G6H0_PHATCPhosphoglycerate kinase. (436 aa)
GLNAGLNA, glutamine synthase; Belongs to the glutamine synthetase family. (716 aa)
PEPCase_2Predicted protein. (877 aa)
ACC1Acetyl-coa carboxylase. (2092 aa)
GOXGlycolate oxidase. (381 aa)
B7G7W5_PHATCPredicted protein. (878 aa)
PGKPhosphoglycerate kinase. (448 aa)
B7G963_PHATCGlucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (477 aa)
B7G9P5_PHATCCitrate synthase; Belongs to the citrate synthase family. (471 aa)
PEPCK1Phosphoenolpyruvate carboxykinase. (612 aa)
PYC2Precursor of carboxylase pyruvate carboxylase. (1264 aa)
FBPFructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (341 aa)
B7GB64_PHATCAlanine glyoxylate aminotransferase. (465 aa)
B7GBF1_PHATCPredicted protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (351 aa)
PYC1Precursor of carboxylase pyruvate carboxylase. (1252 aa)
PDS2Amine oxidase. (589 aa)
FABB3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (427 aa)
DHLTA_3Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (477 aa)
AAT_2Aspartate aminotransferase. (426 aa)
GPI_1Glucose-6-phosphate isomerase; Belongs to the GPI family. (554 aa)
TALTransaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (399 aa)
UGP/PGMUDP-Glucose-Pyrophosphorylase/Phosphoglucomutase. (1057 aa)
FbaC5Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (401 aa)
ACC2Biotin carboxylase. (2282 aa)
B7GEG8_PHATCCPS III, carbamoyl-phosphate synthase mitochindrial. (1463 aa)
MDHPredicted protein; Belongs to the LDH/MDH superfamily. (345 aa)
PGAM_4Phosphoglycerate mutase. (306 aa)
GDCTAminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (421 aa)
B7GEF2_PHATCPlastidic enolase. (483 aa)
chlIMg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family. (353 aa)
psaDPhotosystem I ferredoxin-binding protein. (139 aa)
rbcSRibulose-1,5-bisphosphate carboxylase/oxygenase small subunit. (139 aa)
cbbXRubisco expression protein. (290 aa)
PHATR_50995Predicted protein. (287 aa)
PHATR_28222Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (316 aa)
PHATR_21116Predicted protein. (418 aa)
PDS-like1PDS-like 1, phytoene desaturase-like protein, phytoene dehydrogenase-like protein. (545 aa)
SHMTSerine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (473 aa)
PrkPhosphoribulokinase. (396 aa)
UGDH1UDP-glucose 6-dehydrogenase. (475 aa)
SDH1Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (638 aa)
B7FP19_PHATCPredicted protein. (463 aa)
B7FPN7_PHATCAldehyde dehydrogenase. (551 aa)
SHMT2Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (501 aa)
B7FQX6_PHATCGlucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (342 aa)
Lhcx2Protein fucoxanthin chlorophyll a/c protein. (203 aa)
Fba4Cytosolic aldolase. (299 aa)
B7FRX6_PHATCAcyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (71 aa)
ME1Predicted protein. (638 aa)
FABIEnoyl-acp reductase. (310 aa)
GapC4Glyceraldehyde-3-phosphate dehydrogenase. (336 aa)
B7FSQ0_PHATCTriosephosphate isomerase. (298 aa)
GDCHGlycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (157 aa)
B7FT67_PHATCTriosephosphate isomerase. (290 aa)
B7FTR6_PHATCPredicted protein. (677 aa)
B7FTX1_PHATCATP-dependent Clp protease proteolytic subunit. (260 aa)
PGAM_6Phosphoglycerate mutase. (282 aa)
B7FU89_PHATCFarnesyltranstransferase; Belongs to the FPP/GGPP synthase family. (337 aa)
B7FUG8_PHATCGlycolate oxidase. (431 aa)
B7FUR4_PHATCPredicted protein. (989 aa)
VDEViolaxanthin deepoxidase. (437 aa)
FBPC4Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (457 aa)
TklTransketolase. (711 aa)
B7FV31_PHATCPredicted protein. (440 aa)
B7FVA8_PHATCPredicted protein. (811 aa)
hemCHydroxymethylbilane synthase. (329 aa)
B7FXA2_PHATCSuccinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (443 aa)
6PGDH6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (519 aa)
ACS4Long chain acyl-coa synthetase. (663 aa)
ACS1Long chain acyl-coa synthetase. (721 aa)
ACLATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family. (1082 aa)
PDH1Precursor of dehydrogenase pyruvate dehydrogenase E1, alpha and beta subunits. (814 aa)
PK4bPyruvate kinase; Belongs to the pyruvate kinase family. (539 aa)
PDS1Amine oxidase. (624 aa)
PDHB1Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (360 aa)
B7FZZ1_PHATCAldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (524 aa)
CbsCystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (469 aa)
SCS-alphaSuccinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (309 aa)
B7G128_PHATCPredicted protein. (221 aa)
FSAAldolase fructose-6-phosphate-aldolase. (266 aa)
FABG3-oxoacyl-[acyl-carrier protein. (253 aa)
B7G275_PHATCPredicted protein. (402 aa)
TIM_1Triosephosphate isomerase. (268 aa)
FABDMalonyl-CoA:ACP transacylase. (352 aa)
Fba3Cytosolic class II aldolase. (400 aa)
PPdKPredicted protein. (1011 aa)
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.