19 items (Phaeodactylum tricornutum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	GapC4	Glyceraldehyde-3-phosphate dehydrogenase. (336 aa)
	B7FTA2_PHATC	Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family. (800 aa)
	B7FTV6_PHATC	Nitrate/nitrite transporter. (478 aa)
	Lhcx1	Protein fucoxanthin chlorophyll a/c protein. (209 aa)
	B7G155_PHATC	Predicted protein. (885 aa)
	B7G156_PHATC	Predicted protein. (102 aa)
	B7G3E0_PHATC	Predicted protein; Belongs to the GST superfamily. (225 aa)
	Fba3	Cytosolic class II aldolase. (400 aa)
	B7G518_PHATC	Isocitrate lyase. (593 aa)
	GapC1	Glyceraldehyde-3-phosphate dehydrogenase. (379 aa)
	PEPCase_2	Predicted protein. (877 aa)
	Lhcf15	Protein fucoxanthin chlorophyll a/c protein. (203 aa)
	B7G997_PHATC	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (891 aa)
	hemE	Uroporphyrinogen decarboxylase. (366 aa)
	GluRS_2	Glutamyl-trna synthase; Belongs to the class-I aminoacyl-tRNA synthetase family. (588 aa)
	FbaC5	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (401 aa)
	Fba4	Cytosolic aldolase. (299 aa)
	CHLH	Protoporphyrin IX magnesium chelatase, subunit H. (1343 aa)
	TPI/GapC3	Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (614 aa)

Your Current Organism:

Phaeodactylum tricornutum

NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B7FTA2_PHATC	CHLH	B7FTA2	B5Y3F4	Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.	Protoporphyrin IX magnesium chelatase, subunit H.	0.981
B7FTV6_PHATC	B7G155_PHATC	B7FTV6	B7G155	Nitrate/nitrite transporter.	Predicted protein.	0.736
B7FTV6_PHATC	B7G156_PHATC	B7FTV6	B7G156	Nitrate/nitrite transporter.	Predicted protein.	0.429
B7FTV6_PHATC	B7G997_PHATC	B7FTV6	B7G997	Nitrate/nitrite transporter.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.965
B7G155_PHATC	B7FTV6_PHATC	B7G155	B7FTV6	Predicted protein.	Nitrate/nitrite transporter.	0.736
B7G155_PHATC	B7G156_PHATC	B7G155	B7G156	Predicted protein.	Predicted protein.	0.946
B7G155_PHATC	B7G997_PHATC	B7G155	B7G997	Predicted protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.880
B7G156_PHATC	B7FTV6_PHATC	B7G156	B7FTV6	Predicted protein.	Nitrate/nitrite transporter.	0.429
B7G156_PHATC	B7G155_PHATC	B7G156	B7G155	Predicted protein.	Predicted protein.	0.946
B7G156_PHATC	B7G997_PHATC	B7G156	B7G997	Predicted protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.605
B7G997_PHATC	B7FTV6_PHATC	B7G997	B7FTV6	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Nitrate/nitrite transporter.	0.965
B7G997_PHATC	B7G155_PHATC	B7G997	B7G155	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Predicted protein.	0.880
B7G997_PHATC	B7G156_PHATC	B7G997	B7G156	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Predicted protein.	0.605
CHLH	B7FTA2_PHATC	B5Y3F4	B7FTA2	Protoporphyrin IX magnesium chelatase, subunit H.	Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.	0.981
CHLH	FbaC5	B5Y3F4	B7GE67	Protoporphyrin IX magnesium chelatase, subunit H.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.611
CHLH	TPI/GapC3	B5Y3F4	B7FSI3	Protoporphyrin IX magnesium chelatase, subunit H.	Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	0.650
CHLH	hemE	B5Y3F4	B7GB77	Protoporphyrin IX magnesium chelatase, subunit H.	Uroporphyrinogen decarboxylase.	0.707
Fba3	Fba4	B7G4R3	B7FRC1	Cytosolic class II aldolase.	Cytosolic aldolase.	0.967
Fba3	FbaC5	B7G4R3	B7GE67	Cytosolic class II aldolase.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.968
Fba3	GapC1	B7G4R3	B7G5Q1	Cytosolic class II aldolase.	Glyceraldehyde-3-phosphate dehydrogenase.	0.803