STRINGSTRING
GapC4 GapC4 B7FTA2_PHATC B7FTA2_PHATC B7FTV6_PHATC B7FTV6_PHATC Lhcx1 Lhcx1 B7G155_PHATC B7G155_PHATC B7G156_PHATC B7G156_PHATC B7G3E0_PHATC B7G3E0_PHATC Fba3 Fba3 B7G518_PHATC B7G518_PHATC GapC1 GapC1 PEPCase_2 PEPCase_2 Lhcf15 Lhcf15 B7G997_PHATC B7G997_PHATC hemE hemE GluRS_2 GluRS_2 FbaC5 FbaC5 Fba4 Fba4 CHLH CHLH TPI/GapC3 TPI/GapC3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GapC4Glyceraldehyde-3-phosphate dehydrogenase. (336 aa)
B7FTA2_PHATCMg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family. (800 aa)
B7FTV6_PHATCNitrate/nitrite transporter. (478 aa)
Lhcx1Protein fucoxanthin chlorophyll a/c protein. (209 aa)
B7G155_PHATCPredicted protein. (885 aa)
B7G156_PHATCPredicted protein. (102 aa)
B7G3E0_PHATCPredicted protein; Belongs to the GST superfamily. (225 aa)
Fba3Cytosolic class II aldolase. (400 aa)
B7G518_PHATCIsocitrate lyase. (593 aa)
GapC1Glyceraldehyde-3-phosphate dehydrogenase. (379 aa)
PEPCase_2Predicted protein. (877 aa)
Lhcf15Protein fucoxanthin chlorophyll a/c protein. (203 aa)
B7G997_PHATCNitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (891 aa)
hemEUroporphyrinogen decarboxylase. (366 aa)
GluRS_2Glutamyl-trna synthase; Belongs to the class-I aminoacyl-tRNA synthetase family. (588 aa)
FbaC5Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (401 aa)
Fba4Cytosolic aldolase. (299 aa)
CHLHProtoporphyrin IX magnesium chelatase, subunit H. (1343 aa)
TPI/GapC3Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (614 aa)
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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