STRINGSTRING
Fba3 Fba3 ISIP1 ISIP1 FBP FBP HSF2 HSF2 B7GBY0_PHATC B7GBY0_PHATC B7GDH4_PHATC B7GDH4_PHATC ISIP3 ISIP3 B7G2E7_PHATC B7G2E7_PHATC FRE1 FRE1 ISIP2A ISIP2A FBPC4 FBPC4 Fba4 Fba4 PetJ PetJ psbA psbA petF petF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Fba3Cytosolic class II aldolase. (400 aa)
ISIP1Iron starvation induced protein. (569 aa)
FBPFructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (341 aa)
HSF2DNA-binding heat shock factor. (387 aa)
B7GBY0_PHATCHeat shock factor. (718 aa)
B7GDH4_PHATCCalreticulin. (390 aa)
ISIP3Iron starvation induced protein. (390 aa)
B7G2E7_PHATCPredicted protein. (303 aa)
FRE1Ferric reductase 1. (1326 aa)
ISIP2AIron starvation induced protein. (537 aa)
FBPC4Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (457 aa)
Fba4Cytosolic aldolase. (299 aa)
PetJCytochrome c6, cytochrome c553. (133 aa)
psbAPhotosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (360 aa)
petFFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (99 aa)
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 556484
Other names: P. tricornutum CCAP 1055/1, Phaeodactylum tricornutum CCAP 1055/1
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