(5 nodes) Pilin-like network (Pseudomonas benzenivorans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	SDG76877.1	General secretion pathway protein G. (145 aa)
	SDG76891.1	General secretion pathway protein H. (176 aa)
	SDG76915.1	General secretion pathway protein I. (129 aa)
	SDG76939.1	General secretion pathway protein J. (229 aa)
	SDG76966.1	General secretion pathway protein K. (321 aa)

Your Current Organism:

Pseudomonas benzenivorans

NCBI taxonomy Id: 556533
Other names: CIP 109857, DSM 8628, P. benzenivorans, Pseudomonas benzenivorans Lang et al. 2012 emend. Hameed et al. 2014, Pseudomonas sp. DSM 8628

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDG76877.1	SDG76891.1	SAMN05216603_103363	SAMN05216603_103364	General secretion pathway protein G.	General secretion pathway protein H.	0.978
SDG76877.1	SDG76915.1	SAMN05216603_103363	SAMN05216603_103365	General secretion pathway protein G.	General secretion pathway protein I.	0.959
SDG76877.1	SDG76939.1	SAMN05216603_103363	SAMN05216603_103366	General secretion pathway protein G.	General secretion pathway protein J.	0.990
SDG76877.1	SDG76966.1	SAMN05216603_103363	SAMN05216603_103367	General secretion pathway protein G.	General secretion pathway protein K.	0.987
SDG76891.1	SDG76877.1	SAMN05216603_103364	SAMN05216603_103363	General secretion pathway protein H.	General secretion pathway protein G.	0.978
SDG76891.1	SDG76915.1	SAMN05216603_103364	SAMN05216603_103365	General secretion pathway protein H.	General secretion pathway protein I.	0.973
SDG76891.1	SDG76939.1	SAMN05216603_103364	SAMN05216603_103366	General secretion pathway protein H.	General secretion pathway protein J.	0.994
SDG76891.1	SDG76966.1	SAMN05216603_103364	SAMN05216603_103367	General secretion pathway protein H.	General secretion pathway protein K.	0.987
SDG76915.1	SDG76877.1	SAMN05216603_103365	SAMN05216603_103363	General secretion pathway protein I.	General secretion pathway protein G.	0.959
SDG76915.1	SDG76891.1	SAMN05216603_103365	SAMN05216603_103364	General secretion pathway protein I.	General secretion pathway protein H.	0.973
SDG76915.1	SDG76939.1	SAMN05216603_103365	SAMN05216603_103366	General secretion pathway protein I.	General secretion pathway protein J.	0.999
SDG76915.1	SDG76966.1	SAMN05216603_103365	SAMN05216603_103367	General secretion pathway protein I.	General secretion pathway protein K.	0.998
SDG76939.1	SDG76877.1	SAMN05216603_103366	SAMN05216603_103363	General secretion pathway protein J.	General secretion pathway protein G.	0.990
SDG76939.1	SDG76891.1	SAMN05216603_103366	SAMN05216603_103364	General secretion pathway protein J.	General secretion pathway protein H.	0.994
SDG76939.1	SDG76915.1	SAMN05216603_103366	SAMN05216603_103365	General secretion pathway protein J.	General secretion pathway protein I.	0.999
SDG76939.1	SDG76966.1	SAMN05216603_103366	SAMN05216603_103367	General secretion pathway protein J.	General secretion pathway protein K.	0.999
SDG76966.1	SDG76877.1	SAMN05216603_103367	SAMN05216603_103363	General secretion pathway protein K.	General secretion pathway protein G.	0.987
SDG76966.1	SDG76891.1	SAMN05216603_103367	SAMN05216603_103364	General secretion pathway protein K.	General secretion pathway protein H.	0.987
SDG76966.1	SDG76915.1	SAMN05216603_103367	SAMN05216603_103365	General secretion pathway protein K.	General secretion pathway protein I.	0.998
SDG76966.1	SDG76939.1	SAMN05216603_103367	SAMN05216603_103366	General secretion pathway protein K.	General secretion pathway protein J.	0.999

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