STRINGSTRING
SDG73306.1 SDG73306.1 SDH68884.1 SDH68884.1 SDH46160.1 SDH46160.1 SDH46129.1 SDH46129.1 SDH32032.1 SDH32032.1 SDH05299.1 SDH05299.1 SDG76826.1 SDG76826.1 SDG73196.1 SDG73196.1 SDH99777.1 SDH99777.1 SDI24516.1 SDI24516.1 SDH86145.1 SDH86145.1 SDH85463.1 SDH85463.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDG73306.1Type II/IV secretion system protein. (465 aa)
SDH68884.1General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (573 aa)
SDH46160.1Pilus retraction ATPase PilT. (344 aa)
SDH46129.1Twitching motility protein PilU. (381 aa)
SDH32032.1Twitching motility protein PilU. (376 aa)
SDH05299.1General secretion pathway protein E. (594 aa)
SDG76826.1General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (495 aa)
SDG73196.1Twitching motility protein PilT. (311 aa)
SDH99777.1Type IV pilus assembly protein PilB. (566 aa)
SDI24516.1Twitching motility protein PilU. (401 aa)
SDH86145.1Pilus assembly protein CpaF. (478 aa)
SDH85463.1Type II secretory pathway ATPase GspE/PulE or T4P pilus assembly pathway ATPase PilB. (744 aa)
Your Current Organism:
Pseudomonas benzenivorans
NCBI taxonomy Id: 556533
Other names: CIP 109857, DSM 8628, P. benzenivorans, Pseudomonas benzenivorans Lang et al. 2012 emend. Hameed et al. 2014, Pseudomonas sp. DSM 8628
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