STRINGSTRING
SDG29028.1 SDG29028.1 SDG30930.1 SDG30930.1 SDG35375.1 SDG35375.1 SDG26307.1 SDG26307.1 SDG39374.1 SDG39374.1 pdhA pdhA SDG39430.1 SDG39430.1 SDG49004.1 SDG49004.1 SDG59000.1 SDG59000.1 SDG59031.1 SDG59031.1 fbp fbp gpmI gpmI SDG74946.1 SDG74946.1 SDG75313.1 SDG75313.1 SDG79354.1 SDG79354.1 bamB bamB eno eno SDG91604.1 SDG91604.1 SDH02889.1 SDH02889.1 SDH17509.1 SDH17509.1 SDH26509.1 SDH26509.1 SDH26673.1 SDH26673.1 SDH27245.1 SDH27245.1 SDH29134.1 SDH29134.1 SDH29214.1 SDH29214.1 SDH29480.1 SDH29480.1 tpiA tpiA SDH47262.1 SDH47262.1 pckA pckA SDH44780.1 SDH44780.1 pgk pgk SDH55825.1 SDH55825.1 SDH56038.1 SDH56038.1 SDH53812.1 SDH53812.1 glk glk SDH64463.1 SDH64463.1 SDH63201.1 SDH63201.1 gpmI-2 gpmI-2 SDH63668.1 SDH63668.1 eno-2 eno-2 SDH63773.1 SDH63773.1 SDH64135.1 SDH64135.1 SDH71173.1 SDH71173.1 SDH71218.1 SDH71218.1 SDH68758.1 SDH68758.1 SDH70843.1 SDH70843.1 SDH87337.1 SDH87337.1 SDI02239.1 SDI02239.1 acsA acsA pgi pgi SDI10289.1 SDI10289.1 SDI23338.1 SDI23338.1 SDI24374.1 SDI24374.1 acsA-2 acsA-2 SDI30023.1 SDI30023.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDG29028.1Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (790 aa)
SDG30930.1Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. (496 aa)
SDG35375.1Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (334 aa)
SDG26307.1Dihydrolipoamide dehydrogenase. (478 aa)
SDG39374.1Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (324 aa)
pdhAPyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (332 aa)
SDG39430.1acetyl-CoA synthetase. (587 aa)
SDG49004.1Aldose 1-epimerase. (289 aa)
SDG59000.1Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (881 aa)
SDG59031.1Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (553 aa)
fbpD-fructose 1,6-bisphosphatase; Belongs to the FBPase class 1 family. (335 aa)
gpmIPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (511 aa)
SDG74946.1Putative NAD(P)H quinone oxidoreductase, PIG3 family. (321 aa)
SDG75313.1Dihydrolipoamide dehydrogenase. (438 aa)
SDG79354.1Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (488 aa)
bamBOuter membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (379 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (429 aa)
SDG91604.1S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (370 aa)
SDH02889.1Alcohol dehydrogenase. (387 aa)
SDH17509.1Phosphomannomutase/phosphomannomutase / phosphoglucomutase. (454 aa)
SDH26509.1Membrane-bound lytic murein transglycosylase B. (339 aa)
SDH26673.1Membrane-bound lytic murein transglycosylase B. (429 aa)
SDH27245.1Uncharacterized zinc-type alcohol dehydrogenase-like protein. (344 aa)
SDH29134.1S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (370 aa)
SDH29214.1Alcohol dehydrogenase. (371 aa)
SDH29480.1Alcohol dehydrogenase. (371 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
SDH47262.1Coniferyl-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (476 aa)
pckAPhosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (513 aa)
SDH44780.1Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. (354 aa)
pgkPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (387 aa)
SDH55825.1Alcohol dehydrogenase, class IV. (387 aa)
SDH56038.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (506 aa)
SDH53812.1Coniferyl-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (479 aa)
glkGlucokinase; Belongs to the bacterial glucokinase family. (320 aa)
SDH64463.1Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (333 aa)
SDH63201.1Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (334 aa)
gpmI-2Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (508 aa)
SDH63668.1Glyceraldehyde-3-phosphate dehydrogenase (NADP+). (541 aa)
eno-2Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (426 aa)
SDH63773.1Pyruvate kinase; Belongs to the pyruvate kinase family. (482 aa)
SDH64135.1D-hexose-6-phosphate mutarotase; Belongs to the glucose-6-phosphate 1-epimerase family. (301 aa)
SDH71173.1Pyruvate dehydrogenase E1 component beta subunit. (343 aa)
SDH71218.1Pyruvate dehydrogenase E1 component alpha subunit. (329 aa)
SDH68758.1Glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (306 aa)
SDH70843.1Phosphomannomutase / phosphoglucomutase. (861 aa)
SDH87337.1Pyruvate kinase; Belongs to the pyruvate kinase family. (471 aa)
SDI02239.1Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (332 aa)
acsAacetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (645 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (554 aa)
SDI10289.1Hypothetical protein. (389 aa)
SDI23338.1NADPH:quinone reductase. (330 aa)
SDI24374.1acetoacetyl-CoA synthetase. (651 aa)
acsA-2Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (651 aa)
SDI30023.1Pyruvate kinase; Belongs to the pyruvate kinase family. (483 aa)
Your Current Organism:
Pseudomonas benzenivorans
NCBI taxonomy Id: 556533
Other names: CIP 109857, DSM 8628, P. benzenivorans, Pseudomonas benzenivorans Lang et al. 2012 emend. Hameed et al. 2014, Pseudomonas sp. DSM 8628
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