STRINGSTRING
glk glk SDG34014.1 SDG34014.1 SDI18764.1 SDI18764.1 pgi pgi SDI06833.1 SDI06833.1 SDH70843.1 SDH70843.1 SDH62701.1 SDH62701.1 SDH62574.1 SDH62574.1 SDH62394.1 SDH62394.1 SDH61522.1 SDH61522.1 grpE grpE SDH17509.1 SDH17509.1 SDH16757.1 SDH16757.1 SDH03948.1 SDH03948.1 SDG67902.1 SDG67902.1 SDG67874.1 SDG67874.1 SDG67847.1 SDG67847.1 SDG56304.1 SDG56304.1 SDG41238.1 SDG41238.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glkGlucokinase; Belongs to the bacterial glucokinase family. (320 aa)
SDG34014.1UDP-glucose pyrophosphorylase. (279 aa)
SDI18764.1YMGG-like Gly-zipper. (154 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (554 aa)
SDI06833.1Hypothetical protein. (97 aa)
SDH70843.1Phosphomannomutase / phosphoglucomutase. (861 aa)
SDH62701.1Alpha-amylase. (553 aa)
SDH62574.1Alpha-amylase. (688 aa)
SDH62394.1Alpha-glucosidase. (542 aa)
SDH61522.1Glucosyl-glycerol phosphate synthase. (754 aa)
grpEMolecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] (189 aa)
SDH17509.1Phosphomannomutase/phosphomannomutase / phosphoglucomutase. (454 aa)
SDH16757.1Hydrolase, peptidase M42 family. (396 aa)
SDH03948.1Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family. (1036 aa)
SDG67902.1Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (273 aa)
SDG67874.1Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family. (598 aa)
SDG67847.1Trehalose 6-phosphate synthase. (470 aa)
SDG56304.1YMGG-like Gly-zipper. (160 aa)
SDG41238.1Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (764 aa)
Your Current Organism:
Pseudomonas benzenivorans
NCBI taxonomy Id: 556533
Other names: CIP 109857, DSM 8628, P. benzenivorans, Pseudomonas benzenivorans Lang et al. 2012 emend. Hameed et al. 2014, Pseudomonas sp. DSM 8628
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