(6 nodes) SOCS box domain network (Cuculus canorus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N303_15540	Ankyrin repeat and SOCS box protein 2. (647 aa)
	N303_00995	Ankyrin repeat and SOCS box protein 13. (272 aa)
	N303_05978	Ankyrin repeat and SOCS box protein 7. (318 aa)
	N303_06116	Ankyrin repeat and SOCS box protein 6. (428 aa)
	N303_03400	Ankyrin repeat and SOCS box protein 12. (310 aa)
	N303_04589	Ankyrin repeat and SOCS box protein 1. (272 aa)

Your Current Organism:

Cuculus canorus

NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N303_00995	N303_03400	A0A091G6I9	A0A091H6V9	Ankyrin repeat and SOCS box protein 13.	Ankyrin repeat and SOCS box protein 12.	0.598
N303_00995	N303_04589	A0A091G6I9	A0A091H9L3	Ankyrin repeat and SOCS box protein 13.	Ankyrin repeat and SOCS box protein 1.	0.641
N303_00995	N303_05978	A0A091G6I9	A0A091GDQ0	Ankyrin repeat and SOCS box protein 13.	Ankyrin repeat and SOCS box protein 7.	0.780
N303_00995	N303_06116	A0A091G6I9	A0A091GMB5	Ankyrin repeat and SOCS box protein 13.	Ankyrin repeat and SOCS box protein 6.	0.655
N303_00995	N303_15540	A0A091G6I9	A0A091G1A5	Ankyrin repeat and SOCS box protein 13.	Ankyrin repeat and SOCS box protein 2.	0.637
N303_03400	N303_00995	A0A091H6V9	A0A091G6I9	Ankyrin repeat and SOCS box protein 12.	Ankyrin repeat and SOCS box protein 13.	0.598
N303_03400	N303_04589	A0A091H6V9	A0A091H9L3	Ankyrin repeat and SOCS box protein 12.	Ankyrin repeat and SOCS box protein 1.	0.553
N303_03400	N303_05978	A0A091H6V9	A0A091GDQ0	Ankyrin repeat and SOCS box protein 12.	Ankyrin repeat and SOCS box protein 7.	0.619
N303_03400	N303_06116	A0A091H6V9	A0A091GMB5	Ankyrin repeat and SOCS box protein 12.	Ankyrin repeat and SOCS box protein 6.	0.691
N303_03400	N303_15540	A0A091H6V9	A0A091G1A5	Ankyrin repeat and SOCS box protein 12.	Ankyrin repeat and SOCS box protein 2.	0.654
N303_04589	N303_00995	A0A091H9L3	A0A091G6I9	Ankyrin repeat and SOCS box protein 1.	Ankyrin repeat and SOCS box protein 13.	0.641
N303_04589	N303_03400	A0A091H9L3	A0A091H6V9	Ankyrin repeat and SOCS box protein 1.	Ankyrin repeat and SOCS box protein 12.	0.553
N303_04589	N303_05978	A0A091H9L3	A0A091GDQ0	Ankyrin repeat and SOCS box protein 1.	Ankyrin repeat and SOCS box protein 7.	0.626
N303_04589	N303_06116	A0A091H9L3	A0A091GMB5	Ankyrin repeat and SOCS box protein 1.	Ankyrin repeat and SOCS box protein 6.	0.780
N303_04589	N303_15540	A0A091H9L3	A0A091G1A5	Ankyrin repeat and SOCS box protein 1.	Ankyrin repeat and SOCS box protein 2.	0.617
N303_05978	N303_00995	A0A091GDQ0	A0A091G6I9	Ankyrin repeat and SOCS box protein 7.	Ankyrin repeat and SOCS box protein 13.	0.780
N303_05978	N303_03400	A0A091GDQ0	A0A091H6V9	Ankyrin repeat and SOCS box protein 7.	Ankyrin repeat and SOCS box protein 12.	0.619
N303_05978	N303_04589	A0A091GDQ0	A0A091H9L3	Ankyrin repeat and SOCS box protein 7.	Ankyrin repeat and SOCS box protein 1.	0.626
N303_05978	N303_06116	A0A091GDQ0	A0A091GMB5	Ankyrin repeat and SOCS box protein 7.	Ankyrin repeat and SOCS box protein 6.	0.720
N303_05978	N303_15540	A0A091GDQ0	A0A091G1A5	Ankyrin repeat and SOCS box protein 7.	Ankyrin repeat and SOCS box protein 2.	0.631