STRINGSTRING
N303_13920 N303_13920 N303_05801 N303_05801 N303_01709 N303_01709 N303_09942 N303_09942 N303_13196 N303_13196 N303_13201 N303_13201 N303_13190 N303_13190 N303_13202 N303_13202 N303_00978 N303_00978 N303_13195 N303_13195 N303_13212 N303_13212 N303_14455 N303_14455 N303_13818 N303_13818 N303_15230 N303_15230 N303_01410 N303_01410 N303_00474 N303_00474 N303_13193 N303_13193 N303_09412 N303_09412
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N303_13920Histone H2A; Belongs to the histone H2A family. (97 aa)
N303_05801Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
N303_01709Histone H3; Belongs to the histone H3 family. (136 aa)
N303_09942Histone deacetylase 10. (349 aa)
N303_13196Histone H2B; Belongs to the histone H2B family. (126 aa)
N303_13201Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
N303_13190Histone H2B; Belongs to the histone H2B family. (126 aa)
N303_13202Uncharacterized protein. (100 aa)
N303_00978Histone H2A; Belongs to the histone H2A family. (104 aa)
N303_13195Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
N303_13212Histone H2A; Belongs to the histone H2A family. (130 aa)
N303_14455Histone H2B; Belongs to the histone H2B family. (98 aa)
N303_13818Histone H3.3. (94 aa)
N303_15230Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
N303_01410Histone H2A; Belongs to the histone H2A family. (103 aa)
N303_00474Histone deacetylase 11. (325 aa)
N303_13193Histone H2A; Belongs to the histone H2A family. (129 aa)
N303_09412Histone H2A deubiquitinase MYSM1. (796 aa)
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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