STRINGSTRING
N303_13943 N303_13943 N303_12982 N303_12982 N303_10917 N303_10917 N303_11156 N303_11156 N303_12539 N303_12539 N303_00918 N303_00918 N303_06295 N303_06295 N303_10347 N303_10347 N303_09154 N303_09154 N303_12775 N303_12775 N303_03606 N303_03606 N303_04121 N303_04121 N303_05402 N303_05402 N303_05425 N303_05425 N303_00201 N303_00201 N303_10946 N303_10946 N303_15408 N303_15408 N303_05493 N303_05493 N303_09577 N303_09577 N303_14653 N303_14653 N303_01373 N303_01373 N303_15426 N303_15426 N303_13365 N303_13365 N303_02836 N303_02836 N303_03998 N303_03998 N303_03343 N303_03343 N303_13049 N303_13049 N303_15487 N303_15487 N303_12094 N303_12094 N303_12157 N303_12157 N303_11873 N303_11873 N303_10294 N303_10294 N303_07566 N303_07566 N303_09470 N303_09470 N303_00690 N303_00690 N303_08331 N303_08331 N303_15580 N303_15580 N303_02501 N303_02501 N303_06484 N303_06484 N303_05296 N303_05296 N303_12266 N303_12266 N303_02504 N303_02504 N303_04828 N303_04828 N303_11993 N303_11993 N303_01108 N303_01108 N303_14036 N303_14036 N303_00788 N303_00788 N303_10003 N303_10003 N303_00770 N303_00770 N303_00786 N303_00786 N303_02363 N303_02363 N303_02361 N303_02361 N303_05961 N303_05961 N303_04745 N303_04745 N303_13095 N303_13095 N303_03040 N303_03040 N303_14705 N303_14705 N303_05747 N303_05747 N303_13368 N303_13368 N303_14108 N303_14108 N303_04770 N303_04770 N303_08919 N303_08919 N303_06337 N303_06337 N303_09642 N303_09642 N303_03155 N303_03155 N303_01631 N303_01631 N303_15338 N303_15338 N303_15270 N303_15270 N303_09899 N303_09899 N303_15513 N303_15513 N303_10785 N303_10785 N303_14372 N303_14372 N303_09073 N303_09073 N303_08122 N303_08122 N303_09818 N303_09818 N303_12647 N303_12647 N303_12249 N303_12249 N303_11928 N303_11928 N303_04850 N303_04850 N303_10770 N303_10770 N303_12599 N303_12599 N303_03160 N303_03160 N303_06079 N303_06079 N303_06202 N303_06202
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N303_13943Coiled-coil domain-containing protein 66. (944 aa)
N303_12982SID1 transmembrane family member 2. (776 aa)
N303_10917AF4/FMR2 family member 4. (1160 aa)
N303_11156Transcription elongation factor A protein 1. (265 aa)
N303_12539DNA-directed RNA polymerase III subunit RPC9. (65 aa)
N303_00918DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1168 aa)
N303_06295DNA-directed RNA polymerase I subunit RPA43. (249 aa)
N303_10347DNA-directed RNA polymerase II subunit RPB3. (248 aa)
N303_09154RNA/RNP complex-1-interacting phosphatase. (113 aa)
N303_12775ELL-associated factor 2. (218 aa)
N303_03606Parafibromin. (487 aa)
N303_04121Uncharacterized protein. (70 aa)
N303_05402DNA-directed RNA polymerase III subunit RPC4. (396 aa)
N303_05425Transcription factor IIIB 50 kDa subunit. (381 aa)
N303_00201DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
N303_10946ELL-associated factor 1. (220 aa)
N303_15408snRNA-activating protein complex subunit 3. (308 aa)
N303_05493Transcription elongation factor A N-terminal and central domain-containing protein. (360 aa)
N303_09577DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1669 aa)
N303_14653DNA-directed RNA polymerase II subunit RPB7. (71 aa)
N303_01373NMDA receptor-regulated protein 2. (971 aa)
N303_15426RNA polymerase-associated protein LEO1. (637 aa)
N303_13365Uncharacterized protein. (174 aa)
N303_02836DNA-directed RNA polymerase III subunit RPC8. (206 aa)
N303_03998TATA-box-binding protein. (181 aa)
N303_03343Uncharacterized protein. (129 aa)
N303_13049Transcription elongation factor SPT4. (95 aa)
N303_15487Cyclin-dependent kinase 2-interacting protein. (209 aa)
N303_12094DNA-directed RNA polymerase II subunit RPB11-a. (100 aa)
N303_12157Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1735 aa)
N303_11873RNA polymerase I-specific transcription initiation factor RRN3. (615 aa)
N303_10294DNA-directed RNA polymerases I, II, and III subunit RPABC3. (142 aa)
N303_07566S1 RNA-binding domain-containing protein 1. (527 aa)
N303_09470AF4/FMR2 family member 1. (1203 aa)
N303_00690DNA-directed RNA polymerase II subunit RPB1. (149 aa)
N303_08331Transcription factor TFIIIB component B. (342 aa)
N303_15580Repressor of RNA polymerase III transcription MAF1. (200 aa)
N303_02501Uncharacterized protein. (133 aa)
N303_06484DNA-directed RNA polymerases I and III subunit RPAC2. (86 aa)
N303_05296Regulation of nuclear pre-mRNA domain-containing protein 1A. (271 aa)
N303_12266DNA-directed RNA polymerase III subunit RPC6. (308 aa)
N303_02504Uncharacterized protein. (179 aa)
N303_04828DNA-directed RNA polymerase III subunit RPC7. (210 aa)
N303_11993Transcription elongation factor A protein 2. (285 aa)
N303_01108FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (704 aa)
N303_14036DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1374 aa)
N303_00788Uncharacterized protein. (57 aa)
N303_10003Transcription elongation factor SPT5. (965 aa)
N303_00770snRNA-activating protein complex subunit 1. (315 aa)
N303_00786Transcription factor IIIB 90 kDa subunit. (539 aa)
N303_02363mRNA-capping enzyme. (579 aa)
N303_02361DNA-directed RNA polymerase I subunit RPA43. (247 aa)
N303_05961Chromodomain-helicase-DNA-binding protein 2. (1792 aa)
N303_04745DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1104 aa)
N303_13095DNA-directed RNA polymerase III subunit RPC5. (684 aa)
N303_03040Cyclin-T2; Belongs to the cyclin family. (729 aa)
N303_14705La-related protein 7. (576 aa)
N303_05747DNA-directed RNA polymerase II subunit RPB9; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (105 aa)
N303_13368Cyclin-dependent kinase 12. (1032 aa)
N303_14108Mitochondrial import receptor subunit TOM34. (276 aa)
N303_04770Transcription elongation factor B polypeptide 3. (580 aa)
N303_08919Cyclin-dependent kinase 13. (1138 aa)
N303_06337DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
N303_09642Endonuclease/exonuclease/phosphatase family domain-containing protein 1. (562 aa)
N303_03155Protein IWS1. (615 aa)
N303_01631mRNA cap guanine-N7 methyltransferase. (413 aa)
N303_15338RNA polymerase II elongation factor ELL. (566 aa)
N303_15270DNA-directed RNA polymerases I, II, and III subunit RPABC1. (192 aa)
N303_09899DNA-directed RNA polymerases I, II, and III subunit RPABC2. (136 aa)
N303_15513Cyclin-K; Belongs to the cyclin family. (585 aa)
N303_10785DNA-directed RNA polymerase III subunit RPC10. (63 aa)
N303_14372Cyclin-T1; Belongs to the cyclin family. (657 aa)
N303_09073DNA-directed RNA polymerases I and III subunit RPAC1. (323 aa)
N303_08122RNA polymerase-associated protein RTF1. (646 aa)
N303_09818Transcription elongation factor A N-terminal and central domain-containing protein 2. (185 aa)
N303_12647Transcription elongation factor B polypeptide 3. (748 aa)
N303_12249DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1020 aa)
N303_11928Regulation of nuclear pre-mRNA domain-containing protein 1B. (274 aa)
N303_04850RNA polymerase II elongation factor ELL2. (581 aa)
N303_10770Protein AF-9. (511 aa)
N303_12599DNA-directed RNA polymerase III subunit RPC3. (56 aa)
N303_03160DNA-directed RNA polymerase II subunit RPB4. (142 aa)
N303_06079Cyclin-dependent kinase 9. (343 aa)
N303_06202snRNA-activating protein complex subunit 4. (1350 aa)
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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