STRINGSTRING
N303_05038 N303_05038 N303_08398 N303_08398 N303_12528 N303_12528 N303_13161 N303_13161 N303_02186 N303_02186 N303_11545 N303_11545 N303_07496 N303_07496 N303_12133 N303_12133 N303_10303 N303_10303 N303_05106 N303_05106 N303_02970 N303_02970 N303_02590 N303_02590 N303_15644 N303_15644 N303_10189 N303_10189 N303_10239 N303_10239 N303_15336 N303_15336 N303_10247 N303_10247 N303_04573 N303_04573
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N303_05038Replication protein A 32 kDa subunit. (232 aa)
N303_08398Replication factor C subunit 1. (1143 aa)
N303_12528Replication factor C subunit 2. (316 aa)
N303_13161Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
N303_02186Polyubiquitin-C. (228 aa)
N303_11545Ubiquitin-40S ribosomal protein S27a. (140 aa)
N303_07496DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1253 aa)
N303_12133Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (603 aa)
N303_10303Replication factor C subunit 4. (361 aa)
N303_05106Meiosis-specific with OB domain-containing protein. (469 aa)
N303_02970Replication protein A 14 kDa subunit. (116 aa)
N303_02590Mitotic spindle assembly checkpoint protein MAD2B. (211 aa)
N303_15644ATPase family AAA domain-containing protein 5. (1777 aa)
N303_10189Replication factor C subunit 3. (327 aa)
N303_10239RCC1 and BTB domain-containing protein 1. (531 aa)
N303_15336KxDL motif-containing protein 1. (176 aa)
N303_10247RCC1 and BTB domain-containing protein 2. (531 aa)
N303_04573DNA polymerase zeta catalytic subunit. (3102 aa)
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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