22 items (Cuculus canorus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N303_14483	Von Hippel-Lindau disease tumor suppressor. (150 aa)
	N303_03827	26S proteasome non-ATPase regulatory subunit 8. (130 aa)
	N303_02847	RING-box protein 1. (79 aa)
	N303_04342	Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. (140 aa)
	N303_14122	Ubiquitin-conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family. (140 aa)
	N303_02186	Polyubiquitin-C. (228 aa)
	N303_11545	Ubiquitin-40S ribosomal protein S27a. (140 aa)
	N303_06713	Endothelial PAS domain-containing protein 1. (854 aa)
	N303_08029	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (439 aa)
	N303_13393	Egl nine 1. (223 aa)
	N303_12732	Proteasome subunit alpha type. (248 aa)
	N303_01776	Egl nine 3. (79 aa)
	N303_00696	26S proteasome non-ATPase regulatory subunit 1. (621 aa)
	N303_00767	Hypoxia-inducible factor 1-alpha. (59 aa)
	N303_02663	26S proteasome non-ATPase regulatory subunit 10. (183 aa)
	N303_02193	LIM domain-containing protein 1. (257 aa)
	N303_15554	Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (126 aa)
	N303_00768	Hypoxia-inducible factor 1-alpha. (377 aa)
	N303_05952	Hypoxia-inducible factor 3-alpha. (78 aa)
	N303_09119	Transcription elongation factor B polypeptide 2. (115 aa)
	N303_07389	Wilms tumor protein 1-interacting protein. (212 aa)
	N303_14744	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. (112 aa)

Your Current Organism:

Cuculus canorus

NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N303_00696	N303_00767	A0A091GAQ2	A0A091GBQ6	26S proteasome non-ATPase regulatory subunit 1.	Hypoxia-inducible factor 1-alpha.	0.575
N303_00696	N303_00768	A0A091GAQ2	A0A091GXE4	26S proteasome non-ATPase regulatory subunit 1.	Hypoxia-inducible factor 1-alpha.	0.587
N303_00696	N303_02186	A0A091GAQ2	A0A091FRX5	26S proteasome non-ATPase regulatory subunit 1.	Polyubiquitin-C.	0.971
N303_00696	N303_02663	A0A091GAQ2	A0A091GC20	26S proteasome non-ATPase regulatory subunit 1.	26S proteasome non-ATPase regulatory subunit 10.	0.993
N303_00696	N303_03827	A0A091GAQ2	A0A091GEV8	26S proteasome non-ATPase regulatory subunit 1.	26S proteasome non-ATPase regulatory subunit 8.	0.997
N303_00696	N303_04342	A0A091GAQ2	A0A091FPN9	26S proteasome non-ATPase regulatory subunit 1.	Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.	0.559
N303_00696	N303_05952	A0A091GAQ2	A0A091GTK4	26S proteasome non-ATPase regulatory subunit 1.	Hypoxia-inducible factor 3-alpha.	0.587
N303_00696	N303_06713	A0A091GAQ2	A0A091FY36	26S proteasome non-ATPase regulatory subunit 1.	Endothelial PAS domain-containing protein 1.	0.680
N303_00696	N303_08029	A0A091GAQ2	A0A091G1Q4	26S proteasome non-ATPase regulatory subunit 1.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.999
N303_00696	N303_09119	A0A091GAQ2	A0A091GJM0	26S proteasome non-ATPase regulatory subunit 1.	Transcription elongation factor B polypeptide 2.	0.628
N303_00696	N303_11545	A0A091GAQ2	A0A091FV94	26S proteasome non-ATPase regulatory subunit 1.	Ubiquitin-40S ribosomal protein S27a.	0.982
N303_00696	N303_12732	A0A091GAQ2	A0A091G9J6	26S proteasome non-ATPase regulatory subunit 1.	Proteasome subunit alpha type.	0.994
N303_00696	N303_14122	A0A091GAQ2	A0A091FQ35	26S proteasome non-ATPase regulatory subunit 1.	Ubiquitin-conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family.	0.559
N303_00696	N303_14744	A0A091GAQ2	A0A091FNI3	26S proteasome non-ATPase regulatory subunit 1.	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.	0.633
N303_00696	N303_15554	A0A091GAQ2	A0A091H7H7	26S proteasome non-ATPase regulatory subunit 1.	Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.	0.559
N303_00767	N303_00696	A0A091GBQ6	A0A091GAQ2	Hypoxia-inducible factor 1-alpha.	26S proteasome non-ATPase regulatory subunit 1.	0.575
N303_00767	N303_01776	A0A091GBQ6	A0A091GA21	Hypoxia-inducible factor 1-alpha.	Egl nine 3.	0.852
N303_00767	N303_02186	A0A091GBQ6	A0A091FRX5	Hypoxia-inducible factor 1-alpha.	Polyubiquitin-C.	0.766
N303_00767	N303_02193	A0A091GBQ6	A0A091GCD3	Hypoxia-inducible factor 1-alpha.	LIM domain-containing protein 1.	0.544
N303_00767	N303_02847	A0A091GBQ6	A0A091GFY0	Hypoxia-inducible factor 1-alpha.	RING-box protein 1.	0.652