STRINGSTRING
N303_02741 N303_02741 N303_08859 N303_08859 N303_10245 N303_10245 N303_01441 N303_01441 N303_06400 N303_06400 N303_11545 N303_11545 N303_13172 N303_13172 N303_02186 N303_02186
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N303_02741Fibronectin type III domain-containing protein 3B. (1210 aa)
N303_08859E3 ubiquitin-protein ligase NEDD4. (888 aa)
N303_10245Fibronectin type-III domain-containing protein 3a. (1199 aa)
N303_01441E3 ubiquitin-protein ligase Itchy. (853 aa)
N303_06400NEDD4-like E3 ubiquitin-protein ligase WWP1. (906 aa)
N303_11545Ubiquitin-40S ribosomal protein S27a. (140 aa)
N303_13172Tyrosine-protein kinase. (418 aa)
N303_02186Polyubiquitin-C. (228 aa)
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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