40 items (Cuculus canorus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N303_10807	Serine/threonine-protein kinase Chk1. (423 aa)
	N303_07133	Exonuclease 3'-5' domain-containing protein 2. (622 aa)
	N303_08246	Transcription initiation factor TFIID subunit 3. (917 aa)
	N303_09516	Dual specificity tyrosine-phosphorylation-regulated kinase 2. (533 aa)
	N303_05199	Nucleolar complex protein 2. (675 aa)
	N303_02186	Polyubiquitin-C. (228 aa)
	N303_06363	Tumor protein p53-inducible nuclear protein 1. (237 aa)
	N303_09946	Mitogen-activated protein kinase. (323 aa)
	N303_11545	Ubiquitin-40S ribosomal protein S27a. (140 aa)
	N303_03998	TATA-box-binding protein. (181 aa)
	N303_08277	Uncharacterized protein. (1251 aa)
	N303_04695	TATA box-binding protein-like 1. (161 aa)
	N303_10097	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (315 aa)
	N303_11422	Protein Mdm4; Inhibits p53- and p73-mediated cell cycle arrest and apoptosis by binding its transcriptional activation domain. Belongs to the MDM2/MDM4 family. (474 aa)
	N303_05106	Meiosis-specific with OB domain-containing protein. (469 aa)
	N303_04842	Ankyrin repeat domain-containing protein 32. (420 aa)
	N303_06747	RecQ-mediated genome instability protein 1. (619 aa)
	N303_13381	TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L. (589 aa)
	N303_09507	E3 ubiquitin-protein ligase Mdm2. (485 aa)
	N303_11962	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (391 aa)
	N303_04841	Ankyrin repeat domain-containing protein 32. (211 aa)
	N303_01108	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (704 aa)
	N303_12474	Tumor protein p53-inducible nuclear protein 2. (209 aa)
	N303_08627	ATP-dependent DNA helicase Q4. (262 aa)
	N303_06676	Transcription initiation factor TFIID subunit 9. (255 aa)
	N303_01984	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family. (683 aa)
	N303_03555	TATA-box-binding protein. (299 aa)
	N303_00270	NUAK family SNF1-like kinase 2. (616 aa)
	N303_00948	Putative ankyrin repeat domain-containing protein 31. (740 aa)
	N303_14086	TP53-regulating kinase. (154 aa)
	N303_06056	Uncharacterized protein. (126 aa)
	N303_09130	Transcription initiation factor TFIID subunit 2. (891 aa)
	N303_15336	KxDL motif-containing protein 1. (176 aa)
	N303_06057	Dual specificity tyrosine-phosphorylation-regulated kinase 4; Belongs to the protein kinase superfamily. (368 aa)
	N303_03499	Tudor domain-containing protein 3. (726 aa)
	N303_05349	Dual specificity tyrosine-phosphorylation-regulated kinase 3. (523 aa)
	N303_04749	NUAK family SNF1-like kinase 1. (617 aa)
	N303_12233	Cyclin-A2; Belongs to the cyclin family. (311 aa)
	N303_15273	Serine/threonine-protein kinase STK11; Belongs to the protein kinase superfamily. (449 aa)
	N303_11082	Homeodomain-interacting protein kinase 1. (1152 aa)

Your Current Organism:

Cuculus canorus

NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N303_00270	N303_15273	A0A091GHP2	A0A091H5N3	NUAK family SNF1-like kinase 2.	Serine/threonine-protein kinase STK11; Belongs to the protein kinase superfamily.	0.686
N303_00948	N303_01984	A0A091GHZ1	A0A091GCX3	Putative ankyrin repeat domain-containing protein 31.	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	0.888
N303_00948	N303_02186	A0A091GHZ1	A0A091FRX5	Putative ankyrin repeat domain-containing protein 31.	Polyubiquitin-C.	0.786
N303_00948	N303_04841	A0A091GHZ1	A0A091G962	Putative ankyrin repeat domain-containing protein 31.	Ankyrin repeat domain-containing protein 32.	0.831
N303_00948	N303_06747	A0A091GHZ1	A0A091G6E7	Putative ankyrin repeat domain-containing protein 31.	RecQ-mediated genome instability protein 1.	0.583
N303_00948	N303_08277	A0A091GHZ1	A0A091FVU1	Putative ankyrin repeat domain-containing protein 31.	Uncharacterized protein.	0.566
N303_00948	N303_08627	A0A091GHZ1	A0A091GBP7	Putative ankyrin repeat domain-containing protein 31.	ATP-dependent DNA helicase Q4.	0.566
N303_00948	N303_10807	A0A091GHZ1	A0A091GIS6	Putative ankyrin repeat domain-containing protein 31.	Serine/threonine-protein kinase Chk1.	0.509
N303_00948	N303_11545	A0A091GHZ1	A0A091FV94	Putative ankyrin repeat domain-containing protein 31.	Ubiquitin-40S ribosomal protein S27a.	0.807
N303_01108	N303_10097	A0A091G976	A0A091G2R1	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	0.908
N303_01108	N303_11962	A0A091G976	A0A091G8J4	FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	0.908
N303_01984	N303_00948	A0A091GCX3	A0A091GHZ1	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	Putative ankyrin repeat domain-containing protein 31.	0.888
N303_01984	N303_02186	A0A091GCX3	A0A091FRX5	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	Polyubiquitin-C.	0.719
N303_01984	N303_03499	A0A091GCX3	A0A091GW91	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	Tudor domain-containing protein 3.	0.718
N303_01984	N303_04841	A0A091GCX3	A0A091G962	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	Ankyrin repeat domain-containing protein 32.	0.889
N303_01984	N303_04842	A0A091GCX3	A0A091G5Q7	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	Ankyrin repeat domain-containing protein 32.	0.886
N303_01984	N303_05106	A0A091GCX3	A0A091G592	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	Meiosis-specific with OB domain-containing protein.	0.898
N303_01984	N303_06747	A0A091GCX3	A0A091G6E7	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	RecQ-mediated genome instability protein 1.	0.742
N303_01984	N303_07133	A0A091GCX3	A0A091FI45	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	Exonuclease 3'-5' domain-containing protein 2.	0.683
N303_01984	N303_08277	A0A091GCX3	A0A091FVU1	Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.	Uncharacterized protein.	0.953