(9 nodes) p53-Independent DNA Damage Response network (Cuculus canorus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	N303_02186	Polyubiquitin-C. (228 aa)
	N303_03827	26S proteasome non-ATPase regulatory subunit 8. (130 aa)
	N303_10807	Serine/threonine-protein kinase Chk1. (423 aa)
	N303_15336	KxDL motif-containing protein 1. (176 aa)
	N303_02663	26S proteasome non-ATPase regulatory subunit 10. (183 aa)
	N303_08788	Serine/threonine-protein kinase Chk2. (522 aa)
	N303_00696	26S proteasome non-ATPase regulatory subunit 1. (621 aa)
	N303_12732	Proteasome subunit alpha type. (248 aa)
	N303_08029	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (439 aa)

Your Current Organism:

Cuculus canorus

NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N303_00696	N303_02186	A0A091GAQ2	A0A091FRX5	26S proteasome non-ATPase regulatory subunit 1.	Polyubiquitin-C.	0.971
N303_00696	N303_02663	A0A091GAQ2	A0A091GC20	26S proteasome non-ATPase regulatory subunit 1.	26S proteasome non-ATPase regulatory subunit 10.	0.993
N303_00696	N303_03827	A0A091GAQ2	A0A091GEV8	26S proteasome non-ATPase regulatory subunit 1.	26S proteasome non-ATPase regulatory subunit 8.	0.997
N303_00696	N303_08029	A0A091GAQ2	A0A091G1Q4	26S proteasome non-ATPase regulatory subunit 1.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.999
N303_00696	N303_12732	A0A091GAQ2	A0A091G9J6	26S proteasome non-ATPase regulatory subunit 1.	Proteasome subunit alpha type.	0.994
N303_02186	N303_00696	A0A091FRX5	A0A091GAQ2	Polyubiquitin-C.	26S proteasome non-ATPase regulatory subunit 1.	0.971
N303_02186	N303_02663	A0A091FRX5	A0A091GC20	Polyubiquitin-C.	26S proteasome non-ATPase regulatory subunit 10.	0.659
N303_02186	N303_03827	A0A091FRX5	A0A091GEV8	Polyubiquitin-C.	26S proteasome non-ATPase regulatory subunit 8.	0.965
N303_02186	N303_08029	A0A091FRX5	A0A091G1Q4	Polyubiquitin-C.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.975
N303_02186	N303_08788	A0A091FRX5	A0A091GBF5	Polyubiquitin-C.	Serine/threonine-protein kinase Chk2.	0.600
N303_02186	N303_12732	A0A091FRX5	A0A091G9J6	Polyubiquitin-C.	Proteasome subunit alpha type.	0.957
N303_02186	N303_15336	A0A091FRX5	A0A091GKE1	Polyubiquitin-C.	KxDL motif-containing protein 1.	0.869
N303_02663	N303_00696	A0A091GC20	A0A091GAQ2	26S proteasome non-ATPase regulatory subunit 10.	26S proteasome non-ATPase regulatory subunit 1.	0.993
N303_02663	N303_02186	A0A091GC20	A0A091FRX5	26S proteasome non-ATPase regulatory subunit 10.	Polyubiquitin-C.	0.659
N303_02663	N303_03827	A0A091GC20	A0A091GEV8	26S proteasome non-ATPase regulatory subunit 10.	26S proteasome non-ATPase regulatory subunit 8.	0.971
N303_02663	N303_08029	A0A091GC20	A0A091G1Q4	26S proteasome non-ATPase regulatory subunit 10.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.993
N303_02663	N303_12732	A0A091GC20	A0A091G9J6	26S proteasome non-ATPase regulatory subunit 10.	Proteasome subunit alpha type.	0.641
N303_03827	N303_00696	A0A091GEV8	A0A091GAQ2	26S proteasome non-ATPase regulatory subunit 8.	26S proteasome non-ATPase regulatory subunit 1.	0.997
N303_03827	N303_02186	A0A091GEV8	A0A091FRX5	26S proteasome non-ATPase regulatory subunit 8.	Polyubiquitin-C.	0.965
N303_03827	N303_02663	A0A091GEV8	A0A091GC20	26S proteasome non-ATPase regulatory subunit 8.	26S proteasome non-ATPase regulatory subunit 10.	0.971