48 items (Cuculus canorus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N303_15567	Eukaryotic translation initiation factor 2 subunit 3. (429 aa)
	N303_08082	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (142 aa)
	N303_15474	Eukaryotic translation initiation factor 5. (430 aa)
	N303_04691	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (127 aa)
	N303_00331	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (189 aa)
	N303_03945	40S ribosomal protein S29. (55 aa)
	N303_10302	Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family. (407 aa)
	N303_13467	40S ribosomal protein S27. (83 aa)
	N303_04141	Eukaryotic translation initiation factor 3 subunit G. (286 aa)
	N303_08272	Eukaryotic translation initiation factor 3 subunit J. (209 aa)
	N303_00137	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (143 aa)
	RPSA	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (296 aa)
	N303_03466	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (211 aa)
	EIF3H	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (349 aa)
	N303_02497	Eukaryotic translation initiation factor 4B. (503 aa)
	N303_09253	Eukaryotic translation initiation factor 3 subunit F; Belongs to the eIF-3 subunit F family. (274 aa)
	N303_05152	Eukaryotic translation initiation factor 3 subunit A. (1381 aa)
	N303_03220	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	RPS3A	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (264 aa)
	N303_07835	40S ribosomal protein S4. (228 aa)
	N303_09552	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (109 aa)
	N303_07114	Eukaryotic translation initiation factor 2 subunit 1. (315 aa)
	N303_12529	Eukaryotic translation initiation factor 4H. (254 aa)
	N303_11737	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (201 aa)
	N303_13669	40S ribosomal protein S28. (55 aa)
	N303_10866	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (131 aa)
	N303_07098	Eukaryotic translation initiation factor 3 subunit B. (463 aa)
	N303_09896	Eukaryotic translation initiation factor 3 subunit L. (565 aa)
	N303_09865	Eukaryotic translation initiation factor 3 subunit D; Belongs to the eIF-3 subunit D family. (544 aa)
	N303_15284	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (146 aa)
	N303_13575	40S ribosomal protein S10. (58 aa)
	N303_03098	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (192 aa)
	N303_05752	40S ribosomal protein S17. (120 aa)
	N303_11298	40S ribosomal protein S6. (247 aa)
	N303_13131	ADP-ribosylation factor-like 6-interacting protein 1. (203 aa)
	N303_03511	Eukaryotic translation initiation factor 1A, Y-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (107 aa)
	N303_14035	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (130 aa)
	N303_01444	Eukaryotic translation initiation factor 2 subunit 2. (331 aa)
	N303_02045	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (233 aa)
	N303_13132	40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (134 aa)
	N303_15682	Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (384 aa)
	N303_11170	40S ribosomal protein S20. (118 aa)
	N303_10984	Serine/Arginine-related protein 53. (326 aa)
	N303_10738	Eukaryotic translation initiation factor 3 subunit M. (361 aa)
	N303_05099	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (234 aa)
	N303_14384	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (130 aa)
	N303_07003	Eukaryotic translation initiation factor 3 subunit E; Belongs to the eIF-3 subunit E family. (416 aa)
	N303_12686	Eukaryotic translation initiation factor 3 subunit I. (263 aa)

Your Current Organism:

Cuculus canorus

NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIF3H	N303_00137	A0A091FQQ1	A0A091FS97	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.976
EIF3H	N303_00331	A0A091FQQ1	A0A091FZR1	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.975
EIF3H	N303_01444	A0A091FQQ1	A0A091GDR5	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Eukaryotic translation initiation factor 2 subunit 2.	0.949
EIF3H	N303_02045	A0A091FQQ1	A0A091GD31	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.963
EIF3H	N303_02497	A0A091FQQ1	A0A091FPQ6	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Eukaryotic translation initiation factor 4B.	0.837
EIF3H	N303_03098	A0A091FQQ1	A0A091GHL3	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	0.467
EIF3H	N303_03220	A0A091FQQ1	A0A091FLC2	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.950
EIF3H	N303_03466	A0A091FQQ1	A0A091FQU0	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	0.467
EIF3H	N303_03511	A0A091FQQ1	A0A091GE49	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Eukaryotic translation initiation factor 1A, Y-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.980
EIF3H	N303_03945	A0A091FQQ1	A0A091FZF1	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	40S ribosomal protein S29.	0.957
EIF3H	N303_04141	A0A091FQQ1	A0A091FXM8	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Eukaryotic translation initiation factor 3 subunit G.	0.998
EIF3H	N303_04691	A0A091FQQ1	A0A091FZX3	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.962
EIF3H	N303_05099	A0A091FQQ1	A0A091G707	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.958
EIF3H	N303_05152	A0A091FQQ1	A0A091FMR6	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Eukaryotic translation initiation factor 3 subunit A.	0.999
EIF3H	N303_05752	A0A091FQQ1	A0A091GFY1	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	40S ribosomal protein S17.	0.791
EIF3H	N303_07003	A0A091FQQ1	A0A091G506	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Eukaryotic translation initiation factor 3 subunit E; Belongs to the eIF-3 subunit E family.	0.999
EIF3H	N303_07098	A0A091FQQ1	A0A091GKJ8	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Eukaryotic translation initiation factor 3 subunit B.	0.999
EIF3H	N303_07114	A0A091FQQ1	A0A091FI29	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	Eukaryotic translation initiation factor 2 subunit 1.	0.974
EIF3H	N303_07835	A0A091FQQ1	A0A091FL37	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	40S ribosomal protein S4.	0.974
EIF3H	N303_08082	A0A091FQQ1	A0A091G1M1	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	0.955