12 items (Cuculus canorus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N303_07563	Very low-density lipoprotein receptor. (817 aa)
	N303_01638	AP-2 complex subunit sigma. (64 aa)
	N303_00197	AP-2 complex subunit alpha-2. (921 aa)
	N303_02186	Polyubiquitin-C. (228 aa)
	N303_11545	Ubiquitin-40S ribosomal protein S27a. (140 aa)
	N303_12466	Clathrin heavy chain 1. (1662 aa)
	N303_10280	AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family. (433 aa)
	N303_06761	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (153 aa)
	N303_09828	Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family. (228 aa)
	N303_07705	E3 ubiquitin-protein ligase MYLIP. (417 aa)
	N303_15336	KxDL motif-containing protein 1. (176 aa)
	N303_08165	Oxysterols receptor LXR-alpha. (409 aa)

Your Current Organism:

Cuculus canorus

NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N303_00197	N303_01638	A0A091FN45	A0A091FI92	AP-2 complex subunit alpha-2.	AP-2 complex subunit sigma.	0.997
N303_00197	N303_02186	A0A091FN45	A0A091FRX5	AP-2 complex subunit alpha-2.	Polyubiquitin-C.	0.640
N303_00197	N303_06761	A0A091FN45	A0A091G2G0	AP-2 complex subunit alpha-2.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.923
N303_00197	N303_10280	A0A091FN45	A0A091G0S9	AP-2 complex subunit alpha-2.	AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.	0.997
N303_00197	N303_11545	A0A091FN45	A0A091FV94	AP-2 complex subunit alpha-2.	Ubiquitin-40S ribosomal protein S27a.	0.641
N303_00197	N303_12466	A0A091FN45	A0A091FZY4	AP-2 complex subunit alpha-2.	Clathrin heavy chain 1.	0.930
N303_01638	N303_00197	A0A091FI92	A0A091FN45	AP-2 complex subunit sigma.	AP-2 complex subunit alpha-2.	0.997
N303_01638	N303_02186	A0A091FI92	A0A091FRX5	AP-2 complex subunit sigma.	Polyubiquitin-C.	0.700
N303_01638	N303_06761	A0A091FI92	A0A091G2G0	AP-2 complex subunit sigma.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.904
N303_01638	N303_07563	A0A091FI92	A0A091FQ62	AP-2 complex subunit sigma.	Very low-density lipoprotein receptor.	0.543
N303_01638	N303_09828	A0A091FI92	A0A091G3W4	AP-2 complex subunit sigma.	Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.	0.596
N303_01638	N303_10280	A0A091FI92	A0A091G0S9	AP-2 complex subunit sigma.	AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.	0.999
N303_01638	N303_11545	A0A091FI92	A0A091FV94	AP-2 complex subunit sigma.	Ubiquitin-40S ribosomal protein S27a.	0.636
N303_01638	N303_12466	A0A091FI92	A0A091FZY4	AP-2 complex subunit sigma.	Clathrin heavy chain 1.	0.928
N303_02186	N303_00197	A0A091FRX5	A0A091FN45	Polyubiquitin-C.	AP-2 complex subunit alpha-2.	0.640
N303_02186	N303_01638	A0A091FRX5	A0A091FI92	Polyubiquitin-C.	AP-2 complex subunit sigma.	0.700
N303_02186	N303_06761	A0A091FRX5	A0A091G2G0	Polyubiquitin-C.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.580
N303_02186	N303_07563	A0A091FRX5	A0A091FQ62	Polyubiquitin-C.	Very low-density lipoprotein receptor.	0.538
N303_02186	N303_07705	A0A091FRX5	A0A091GBP0	Polyubiquitin-C.	E3 ubiquitin-protein ligase MYLIP.	0.778
N303_02186	N303_08165	A0A091FRX5	A0A091GNL5	Polyubiquitin-C.	Oxysterols receptor LXR-alpha.	0.580