STRINGSTRING
N303_06597 N303_06597 N303_02491 N303_02491 N303_09035 N303_09035 N303_02186 N303_02186 N303_09309 N303_09309 N303_01146 N303_01146 N303_11545 N303_11545 N303_08500 N303_08500 N303_14175 N303_14175 N303_12953 N303_12953 N303_13062 N303_13062 N303_03117 N303_03117 N303_04300 N303_04300 N303_15335 N303_15335 N303_09644 N303_09644 N303_09119 N303_09119 N303_03051 N303_03051 N303_08682 N303_08682 N303_15706 N303_15706 N303_11039 N303_11039
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N303_06597Ubiquitin domain-containing protein UBFD1. (241 aa)
N303_02491BAG family molecular chaperone regulator 1. (194 aa)
N303_09035Transmembrane and ubiquitin-like domain-containing protein 2. (145 aa)
N303_02186Polyubiquitin-C. (228 aa)
N303_09309Splicing factor 3A subunit 1. (769 aa)
N303_01146RBR-type E3 ubiquitin transferase. (462 aa)
N303_11545Ubiquitin-40S ribosomal protein S27a. (140 aa)
N303_08500Small ubiquitin-related modifier. (102 aa)
N303_14175Ubiquitin domain-containing protein 1. (205 aa)
N303_12953Ubiquitin carboxyl-terminal hydrolase. (490 aa)
N303_13062Ubiquitin carboxyl-terminal hydrolase 48. (992 aa)
N303_03117Ubiquitin-like domain-containing CTD phosphatase 1. (318 aa)
N303_04300Ubiquitin-like 7. (379 aa)
N303_15335Ubiquitin-60S ribosomal protein L40. (128 aa)
N303_09644Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein. (406 aa)
N303_09119Transcription elongation factor B polypeptide 2. (115 aa)
N303_03051Ubiquitin domain-containing protein 2. (200 aa)
N303_086822'-5'-oligoadenylate synthase-like 1. (498 aa)
N303_15706Small ubiquitin-related modifier. (89 aa)
N303_11039Small ubiquitin-related modifier. (87 aa)
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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