STRINGSTRING
N303_09347 N303_09347 N303_14197 N303_14197 N303_10126 N303_10126 N303_11277 N303_11277 N303_05092 N303_05092 N303_00345 N303_00345 N303_03950 N303_03950 N303_08516 N303_08516 N303_12098 N303_12098 N303_12073 N303_12073 N303_05910 N303_05910 N303_10332 N303_10332 N303_09248 N303_09248 N303_05188 N303_05188 N303_13161 N303_13161 N303_12541 N303_12541 N303_10086 N303_10086 N303_04907 N303_04907 N303_05455 N303_05455 N303_14751 N303_14751 N303_03353 N303_03353 N303_13554 N303_13554 N303_01077 N303_01077 N303_04577 N303_04577 N303_11848 N303_11848 N303_13607 N303_13607 N303_13852 N303_13852 FEN1 FEN1 N303_14488 N303_14488 N303_14095 N303_14095 N303_14530 N303_14530 N303_07976 N303_07976 N303_01568 N303_01568 N303_10788 N303_10788 N303_12488 N303_12488 N303_09437 N303_09437 N303_13821 N303_13821 N303_02118 N303_02118
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N303_09347G/T mismatch-specific thymine DNA glycosylase. (401 aa)
N303_14197DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (489 aa)
N303_10126Cysteine-rich secretory protein LCCL domain-containing 2. (503 aa)
N303_11277DNA polymerase epsilon subunit 3. (121 aa)
N303_05092Endonuclease III-like 1. (257 aa)
N303_00345Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (429 aa)
N303_03950DNA polymerase epsilon subunit 2. (503 aa)
N303_08516Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (164 aa)
N303_12098PRKR-interacting protein 1. (148 aa)
N303_12073DNA ligase. (933 aa)
N303_05910Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family. (264 aa)
N303_10332Flap endonuclease GEN 1. (536 aa)
N303_09248Nucleolar and coiled-body phosphoprotein 1. (616 aa)
N303_05188Methylated-DNA--protein-cysteine methyltransferase. (116 aa)
N303_13161Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
N303_12541Von Willebrand factor A domain-containing protein 5A. (222 aa)
N303_10086tRNA-specific adenosine deaminase 2. (157 aa)
N303_04907Methyl-CpG-binding domain protein 3. (252 aa)
N303_05455DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (315 aa)
N303_14751Cysteine-rich secretory protein LCCL domain-containing 1. (432 aa)
N303_03353Methyl-CpG-binding domain protein 2. (221 aa)
N303_13554DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2256 aa)
N303_01077Endonuclease 8-like 3. (552 aa)
N303_04577General transcription factor 3C polypeptide 6. (198 aa)
N303_11848High mobility group protein B2. (207 aa)
N303_13607Single-strand selective monofunctional uracil DNA glycosylase. (176 aa)
N303_13852Chromatin accessibility complex protein 1. (90 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (382 aa)
N303_14488Methyl-CpG-binding domain protein 4. (182 aa)
N303_14095Peptidase inhibitor R3HDML. (242 aa)
N303_14530N-glycosylase/DNA lyase. (243 aa)
N303_07976High mobility group protein B3. (202 aa)
N303_01568Methyltransferase-like 4; Belongs to the MT-A70-like family. (467 aa)
N303_10788DNA-3-methyladenine glycosylase. (273 aa)
N303_12488DNA polymerase delta subunit 2. (453 aa)
N303_09437VWFA and cache domain-containing protein 1. (1210 aa)
N303_13821Poly [ADP-ribose] polymerase 1. (94 aa)
N303_02118High mobility group protein B1. (215 aa)
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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