Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KMQ58438.1 | KMQ59401.1 | ACM46_22310 | ACM46_20035 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.808 |
| KMQ58438.1 | KMQ60026.1 | ACM46_22310 | ACM46_17395 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.738 |
| KMQ58438.1 | KMQ63032.1 | ACM46_22310 | ACM46_13885 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
| KMQ58438.1 | KMQ64703.1 | ACM46_22310 | ACM46_10690 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.927 |
| KMQ58438.1 | KMQ65681.1 | ACM46_22310 | ACM46_07360 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.467 |
| KMQ58438.1 | KMQ66128.1 | ACM46_22310 | ACM46_00760 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| KMQ58438.1 | KMQ66749.1 | ACM46_22310 | ACM46_04390 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.580 |
| KMQ58438.1 | dnaX | ACM46_22310 | ACM46_15320 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.424 |
| KMQ58438.1 | ligA | ACM46_22310 | ACM46_18770 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.834 |
| KMQ58438.1 | mutL | ACM46_22310 | ACM46_03935 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.808 |
| KMQ58438.1 | mutS | ACM46_22310 | ACM46_03240 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.500 |
| KMQ58586.1 | KMQ58587.1 | ACM46_21315 | ACM46_21330 | Tellurium resistance protein TerD; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemical-damaging agent resistance protein C; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.523 |
| KMQ58587.1 | KMQ58586.1 | ACM46_21330 | ACM46_21315 | Chemical-damaging agent resistance protein C; Derived by automated computational analysis using gene prediction method: Protein Homology. | Tellurium resistance protein TerD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.523 |
| KMQ58672.1 | KMQ66815.1 | ACM46_21880 | ACM46_04760 | DNA mismatch repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.549 |
| KMQ59401.1 | KMQ58438.1 | ACM46_20035 | ACM46_22310 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.808 |
| KMQ59401.1 | KMQ61651.1 | ACM46_20035 | ACM46_15325 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.429 |
| KMQ59401.1 | KMQ63032.1 | ACM46_20035 | ACM46_13885 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.474 |
| KMQ59401.1 | KMQ64343.1 | ACM46_20035 | ACM46_08610 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
| KMQ59401.1 | KMQ64703.1 | ACM46_20035 | ACM46_10690 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.938 |
| KMQ59401.1 | dnaX | ACM46_20035 | ACM46_15320 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.444 |
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