(13 nodes) Methylguanosine-cap decapping network (Lachancea thermotolerans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5DC12_LACTC	KLTH0A06974p. (868 aa)
	C5DBL8_LACTC	KLTH0A03652p. (772 aa)
	C5DBQ4_LACTC	KLTH0A04532p. (611 aa)
	C5DCR0_LACTC	KLTH0B05104p. (893 aa)
	C5DDN4_LACTC	KLTH0C02420p. (568 aa)
	C5DJX3_LACTC	KLTH0F19822p. (204 aa)
	LSM1	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (160 aa)
	C5DLC6_LACTC	KLTH0F11880p. (563 aa)
	C5DLH0_LACTC	KLTH0G00660p. (383 aa)
	C5DNA8_LACTC	KLTH0G15488p. (364 aa)
	C5E212_LACTC	KLTH0H01320p. (190 aa)
	C5E223_LACTC	KLTH0H01562p; Belongs to the DEAD box helicase family. (491 aa)
	C5E3I9_LACTC	KLTH0H13948p. (497 aa)

Your Current Organism:

Lachancea thermotolerans

NCBI taxonomy Id: 559295
Other names: Kluyveromyces thermotolerans CBS 6340, L. thermotolerans CBS 6340, Lachancea thermotolerans CBS 6340

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5DBL8_LACTC	C5DBQ4_LACTC	C5DBL8	C5DBQ4	KLTH0A03652p.	KLTH0A04532p.	0.994
C5DBL8_LACTC	C5DC12_LACTC	C5DBL8	C5DC12	KLTH0A03652p.	KLTH0A06974p.	0.765
C5DBL8_LACTC	C5DLC6_LACTC	C5DBL8	C5DLC6	KLTH0A03652p.	KLTH0F11880p.	0.997
C5DBL8_LACTC	C5E212_LACTC	C5DBL8	C5E212	KLTH0A03652p.	KLTH0H01320p.	0.993
C5DBL8_LACTC	C5E223_LACTC	C5DBL8	C5E223	KLTH0A03652p.	KLTH0H01562p; Belongs to the DEAD box helicase family.	0.972
C5DBQ4_LACTC	C5DBL8_LACTC	C5DBQ4	C5DBL8	KLTH0A04532p.	KLTH0A03652p.	0.994
C5DBQ4_LACTC	C5DC12_LACTC	C5DBQ4	C5DC12	KLTH0A04532p.	KLTH0A06974p.	0.967
C5DBQ4_LACTC	C5DLC6_LACTC	C5DBQ4	C5DLC6	KLTH0A04532p.	KLTH0F11880p.	0.994
C5DBQ4_LACTC	C5E212_LACTC	C5DBQ4	C5E212	KLTH0A04532p.	KLTH0H01320p.	0.994
C5DBQ4_LACTC	C5E223_LACTC	C5DBQ4	C5E223	KLTH0A04532p.	KLTH0H01562p; Belongs to the DEAD box helicase family.	0.979
C5DC12_LACTC	C5DBL8_LACTC	C5DC12	C5DBL8	KLTH0A06974p.	KLTH0A03652p.	0.765
C5DC12_LACTC	C5DBQ4_LACTC	C5DC12	C5DBQ4	KLTH0A06974p.	KLTH0A04532p.	0.967
C5DC12_LACTC	C5DCR0_LACTC	C5DC12	C5DCR0	KLTH0A06974p.	KLTH0B05104p.	0.996
C5DC12_LACTC	C5DJX3_LACTC	C5DC12	C5DJX3	KLTH0A06974p.	KLTH0F19822p.	0.939
C5DC12_LACTC	C5DLC6_LACTC	C5DC12	C5DLC6	KLTH0A06974p.	KLTH0F11880p.	0.763
C5DC12_LACTC	C5E212_LACTC	C5DC12	C5E212	KLTH0A06974p.	KLTH0H01320p.	0.698
C5DC12_LACTC	C5E223_LACTC	C5DC12	C5E223	KLTH0A06974p.	KLTH0H01562p; Belongs to the DEAD box helicase family.	0.997
C5DC12_LACTC	C5E3I9_LACTC	C5DC12	C5E3I9	KLTH0A06974p.	KLTH0H13948p.	0.944
C5DC12_LACTC	LSM1	C5DC12	C5DKN0	KLTH0A06974p.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.999
C5DCR0_LACTC	C5DC12_LACTC	C5DCR0	C5DC12	KLTH0B05104p.	KLTH0A06974p.	0.996