STRINGSTRING
BDBG_03014 BDBG_03014 BDBG_03950 BDBG_03950 BDBG_06889 BDBG_06889 BDBG_06206 BDBG_06206 BDBG_02650 BDBG_02650 NTH1 NTH1 BDBG_01402 BDBG_01402
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BDBG_03014DNA repair helicase rad15. (797 aa)
BDBG_03950DNA excision repair protein ERCC-5. (1166 aa)
BDBG_06889DNA excision repair protein ERCC-4. (978 aa)
BDBG_06206DNA excision repair protein ERCC-1. (359 aa)
BDBG_02650DNA-repair protein complementing XP-A cells. (371 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (537 aa)
BDBG_01402DNA excision repair protein ERCC-3. (833 aa)
Your Current Organism:
Blastomyces gilchristii
NCBI taxonomy Id: 559298
Other names: Ajellomyces dermatitidis SLH#14081, Ajellomyces dermatitidis SLH14081, B. gilchristii SLH14081, Blastomyces dermatitidis SLH14081, Blastomyces gilchristii SLH14081
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