(11 nodes) Mixed, incl. Glyoxylate metabolic process, and D-amino acid catabolic process network (Millerozyma farinosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_005594	Malate synthase; Belongs to the malate synthase family. (550 aa)
	Piso0_005208-2	Piso0_005208 protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (365 aa)
	Piso0_005297-2	Piso0_005297 protein. (357 aa)
	Piso0_003695	Piso0_003695 protein; Belongs to the DapA family. (318 aa)
	Piso0_003773	Isocitrate lyase. (551 aa)
	Piso0_002222-2	Piso0_002222 protein. (876 aa)
	Piso0_001351-2	Malate synthase; Belongs to the malate synthase family. (556 aa)
	Piso0_000590	Isocitrate lyase. (569 aa)
	Piso0_000034	Piso0_000034 protein. (417 aa)
	Piso0_000137	Piso0_000137 protein. (355 aa)
	Piso0_000347	Piso0_000347 protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (363 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000034	Piso0_000137	G8YSX3	G8YT66	Piso0_000034 protein.	Piso0_000137 protein.	0.841
Piso0_000034	Piso0_000347	G8YSX3	G8YV70	Piso0_000034 protein.	Piso0_000347 protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.927
Piso0_000034	Piso0_000590	G8YSX3	G8YST1	Piso0_000034 protein.	Isocitrate lyase.	0.810
Piso0_000034	Piso0_001351-2	G8YSX3	G8YMX9	Piso0_000034 protein.	Malate synthase; Belongs to the malate synthase family.	0.787
Piso0_000034	Piso0_002222-2	G8YSX3	G8YEG4	Piso0_000034 protein.	Piso0_002222 protein.	0.754
Piso0_000034	Piso0_003695	G8YSX3	G8Y6C4	Piso0_000034 protein.	Piso0_003695 protein; Belongs to the DapA family.	0.650
Piso0_000034	Piso0_003773	G8YSX3	G8Y6K2	Piso0_000034 protein.	Isocitrate lyase.	0.951
Piso0_000034	Piso0_005208-2	G8YSX3	G8Y4H8	Piso0_000034 protein.	Piso0_005208 protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.898
Piso0_000034	Piso0_005297-2	G8YSX3	G8Y4Q8	Piso0_000034 protein.	Piso0_005297 protein.	0.888
Piso0_000034	Piso0_005594	G8YSX3	G8XZE8	Piso0_000034 protein.	Malate synthase; Belongs to the malate synthase family.	0.903
Piso0_000137	Piso0_000034	G8YT66	G8YSX3	Piso0_000137 protein.	Piso0_000034 protein.	0.841
Piso0_000137	Piso0_000347	G8YT66	G8YV70	Piso0_000137 protein.	Piso0_000347 protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.640
Piso0_000137	Piso0_000590	G8YT66	G8YST1	Piso0_000137 protein.	Isocitrate lyase.	0.631
Piso0_000137	Piso0_001351-2	G8YT66	G8YMX9	Piso0_000137 protein.	Malate synthase; Belongs to the malate synthase family.	0.556
Piso0_000137	Piso0_003695	G8YT66	G8Y6C4	Piso0_000137 protein.	Piso0_003695 protein; Belongs to the DapA family.	0.525
Piso0_000137	Piso0_003773	G8YT66	G8Y6K2	Piso0_000137 protein.	Isocitrate lyase.	0.895
Piso0_000137	Piso0_005208-2	G8YT66	G8Y4H8	Piso0_000137 protein.	Piso0_005208 protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.816
Piso0_000137	Piso0_005297-2	G8YT66	G8Y4Q8	Piso0_000137 protein.	Piso0_005297 protein.	0.834
Piso0_000137	Piso0_005594	G8YT66	G8XZE8	Piso0_000137 protein.	Malate synthase; Belongs to the malate synthase family.	0.820
Piso0_000347	Piso0_000034	G8YV70	G8YSX3	Piso0_000347 protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Piso0_000034 protein.	0.927