(32 nodes) Glycine, serine and threonine metabolism, and Electron-transferring-flavoprotein dehydrogenase activity network (Millerozyma farinosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Piso0_005912	Piso0_005912 protein. (262 aa)
	Piso0_005297	Piso0_005297 protein. (357 aa)
	Piso0_005355	Glutamine synthetase. (368 aa)
	Piso0_005919	Piso0_005919 protein. (234 aa)
	Piso0_005021-2	Piso0_005021 protein. (476 aa)
	Piso0_005237-2	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (573 aa)
	Piso0_004537	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (393 aa)
	Piso0_004030	Piso0_004030 protein. (439 aa)
	Piso0_004452	Piso0_004452 protein. (72 aa)
	Piso0_004730	Piso0_004730 protein. (346 aa)
	Piso0_004177	Piso0_004177 protein. (458 aa)
	Piso0_002086	Piso0_002086 protein. (348 aa)
	Piso0_002685	Piso0_002685 protein. (370 aa)
	Piso0_002794	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1041 aa)
	Piso0_001224	Piso0_001224 protein. (376 aa)
	Piso0_002086-2	Piso0_002086 protein. (348 aa)
	Piso0_002685-2	Piso0_002685 protein. (367 aa)
	Piso0_002794-2	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1039 aa)
	Piso0_003243	Piso0_003243 protein. (452 aa)
	Piso0_002889	Piso0_002889 protein. (426 aa)
	Piso0_001419	Piso0_001419 protein. (426 aa)
	Piso0_001550-2	Piso0_001550 protein. (160 aa)
	Piso0_000661	Piso0_000661 protein. (373 aa)
	Piso0_000721	Piso0_000721 protein. (369 aa)
	Piso0_000826	Piso0_000826 protein; Belongs to the peptidase M24B family. (699 aa)
	Piso0_000661-2	Piso0_000661 protein. (373 aa)
	Piso0_000697-2	Piso0_000697 protein. (529 aa)
	Piso0_000721-2	Piso0_000721 protein. (369 aa)
	Piso0_000826-2	Piso0_000826 protein; Belongs to the peptidase M24B family. (699 aa)
	Piso0_000005	Piso0_000005 protein. (262 aa)
	Piso0_000298	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (187 aa)
	Piso0_000298-2	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (187 aa)

Your Current Organism:

Millerozyma farinosa

NCBI taxonomy Id: 559304
Other names: M. farinosa CBS 7064, Millerozyma farinosa CBS 7064, Pichia farinosa CBS 7064

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Piso0_000005	Piso0_000298	G8YSU7	G8YTL7	Piso0_000005 protein.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.592
Piso0_000005	Piso0_000298-2	G8YSU7	G8YV24	Piso0_000005 protein.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.592
Piso0_000005	Piso0_000661	G8YSU7	G8YPQ0	Piso0_000005 protein.	Piso0_000661 protein.	0.867
Piso0_000005	Piso0_000661-2	G8YSU7	G8YR61	Piso0_000005 protein.	Piso0_000661 protein.	0.867
Piso0_000005	Piso0_000697-2	G8YSU7	G8YR97	Piso0_000005 protein.	Piso0_000697 protein.	0.521
Piso0_000005	Piso0_000721	G8YSU7	G8YPV8	Piso0_000005 protein.	Piso0_000721 protein.	0.750
Piso0_000005	Piso0_000721-2	G8YSU7	G8YRC1	Piso0_000005 protein.	Piso0_000721 protein.	0.750
Piso0_000005	Piso0_000826	G8YSU7	G8YQ62	Piso0_000005 protein.	Piso0_000826 protein; Belongs to the peptidase M24B family.	0.521
Piso0_000005	Piso0_000826-2	G8YSU7	G8YRM2	Piso0_000005 protein.	Piso0_000826 protein; Belongs to the peptidase M24B family.	0.521
Piso0_000005	Piso0_001224	G8YSU7	G8YDS7	Piso0_000005 protein.	Piso0_001224 protein.	0.750
Piso0_000005	Piso0_001419	G8YSU7	G8YN44	Piso0_000005 protein.	Piso0_001419 protein.	0.585
Piso0_000005	Piso0_001550-2	G8YSU7	G8YNG7	Piso0_000005 protein.	Piso0_001550 protein.	0.750
Piso0_000005	Piso0_002086	G8YSU7	G8YBN2	Piso0_000005 protein.	Piso0_002086 protein.	0.831
Piso0_000005	Piso0_002086-2	G8YSU7	G8YE31	Piso0_000005 protein.	Piso0_002086 protein.	0.830
Piso0_000005	Piso0_002685	G8YSU7	G8YD91	Piso0_000005 protein.	Piso0_002685 protein.	0.867
Piso0_000005	Piso0_002685-2	G8YSU7	G8YFP7	Piso0_000005 protein.	Piso0_002685 protein.	0.867
Piso0_000005	Piso0_002794	G8YSU7	G8YDI9	Piso0_000005 protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.874
Piso0_000005	Piso0_002794-2	G8YSU7	G8YFZ8	Piso0_000005 protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.874
Piso0_000005	Piso0_004452	G8YSU7	G8Y8U7	Piso0_000005 protein.	Piso0_004452 protein.	0.840
Piso0_000005	Piso0_004537	G8YSU7	G8Y5R0	Piso0_000005 protein.	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	0.840